Xylella fastidiosa subsp. sandyi Ann-1: D934_04700
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Entry
D934_04700 CDS
T03318
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
xfs
Xylella fastidiosa subsp. sandyi Ann-1
Pathway
xfs02020
Two-component system
xfs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D934_04700
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D934_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfs03021
]
D934_04700
Transcription machinery [BR:
xfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D934_04700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_IclR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AIC09739
UniProt:
A0A060GZ18
LinkDB
All DBs
Position
complement(1021484..1022824)
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AA seq
446 aa
AA seq
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MTPQLHQSIRLLQMSNAELQLEITAAIESNPLLDWAENQSSETSEATEREVETEDWQAKE
SAWDINGSKSNENDDNNPAERLTTGNTLTDHLLWQLHLSPLSARDYQIGTVLIDAIEEDG
YLRELLSTLTATLAPLSVDESELLPVLRHIQSFDPSGVAARSLAECLTLQLKSLREAIPG
RTLALQIVNSPLLEQLPRSGVTGLARELKRPSQDVQQAVELIRGLDPRPGKKIGDLEVGT
YVVPDCVIWRQHGLWQAALLERAFPQVVLHRGYEQLINSCNDANASYLRNQLQEARWLLK
GLEARGETLLKVVNSLIRHQAGFLEFGQHALRPLTIRELATELALHESTVSRAIAGKYVR
TPRGTLPLRTFFASGISTDSGGETSSSAIQAIIRRLIETENPRKPLSDAKLAELLKTSGI
PVARRTIAKYRDAMNISASHERVRVL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccagctacaccaaagcatccgtctgctgcaaatgtccaacgccgaattgcaa
ctggaaatcaccgccgcgatagagagcaatccactcttggactgggccgagaaccaatca
tcggagaccagcgaagctaccgaaagggaagtagaaacagaagattggcaagccaaagaa
tccgcctgggatatcaacggcagtaaaagcaacgaaaatgatgacaacaaccctgctgaa
cgtctgaccaccgggaacactctcactgatcacttgctgtggcaactgcacctctcccca
ctgtcagcacgtgattaccaaataggcaccgtcttgattgatgccatagaagaagatggt
tacctacgtgaacttttgtccacactgactgcaaccctggccccgttatccgtagatgaa
agcgaactgctaccagtattacgacacattcaatcttttgacccgagcggcgtggctgca
cgctcgctggccgagtgcttgacactgcaactgaaatcattgagagaagcgatacccgga
cgcacacttgcactgcagattgtcaacagcccactgctcgaacaattgccgcgcagtggt
gtcaccggactggcacgcgaactgaaacgaccctcccaagacgtccaacaggcagtggaa
ttgatccgtggactggaccctcgcccaggtaagaaaattggcgacttagaagttggaacc
tacgttgtaccggactgtgtgatctggcgccaacatgggctgtggcaagccgcgctgttg
gaacgtgcattcccacaggtcgtcctccaccgcggctacgaacagctcatcaacagctgc
aatgacgccaatgcgagctacctacgcaaccaactccaggaagcacggtggctgctcaag
ggcctggaagcacgcggtgaaaccttgttaaaagtggtaaacagcctcatacgtcaccaa
gcgggattcttggaattcggccaacacgcgttacgtccattgactatccgcgaattagca
acggaacttgccctgcatgaatccaccgtatcccgtgcaattgctggcaagtatgtacgc
accccacgtggcaccttaccgctacgcacctttttcgcttcaggaatcagcaccgacagc
ggcggagagacctccagctctgccattcaagcaatcatcagacgtctcatagaaactgaa
aacccccgcaagccactctctgacgccaaactagctgaattgctgaagacatccggtatc
ccagtagcgcgacgcaccatagcaaagtatcgtgatgctatgaacatctccgcatcccac
gaacgcgtccgagtcctctga
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