Xylella fastidiosa subsp. sandyi Ann-1: D934_07355
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Entry
D934_07355 CDS
T03318
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xfs
Xylella fastidiosa subsp. sandyi Ann-1
Pathway
xfs03030
DNA replication
xfs03430
Mismatch repair
xfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D934_07355
03430 Mismatch repair
D934_07355
03440 Homologous recombination
D934_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfs03032
]
D934_07355
03400 DNA repair and recombination proteins [BR:
xfs03400
]
D934_07355
Enzymes [BR:
xfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D934_07355
DNA replication proteins [BR:
xfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D934_07355
DNA repair and recombination proteins [BR:
xfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D934_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
ResIII
Mg_chelatase
AAA_18
AAA_7
AAA_30
PIF1
AAA_2
nSTAND3
TsaE
AAA_19
ABC_tran
Rad17
AAA_24
SKI
Motif
Other DBs
NCBI-ProteinID:
AIC11288
UniProt:
A0A060H6R9
LinkDB
All DBs
Position
1489595..1491220
Genome browser
AA seq
541 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALESGRLHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGRCTACLDIDVGRYIDLLEIDAASNTGVDDVREMIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIQRQIAKILTAEQITADDAAIIELSKAADGSLRDGLSLLDQAIAYAGGTLREGAVRDM
LGTVDRTQVEVMLAALIAGDGDRLLRVIATLAEFSPDWGGVLEALAEALHRIQVQQLVPS
VVFAGDGLNVALLAEQTQPEVVQLWYQMAINGRHDLHLAPSPRVGFEMAVLRMLAFRPVP
MVAPGMVSTEGQSVNAPLMASVGKDAHGANGYTMSQSPSDLQKVRVGSLDGKITDVGQWL
ALVERIELSGPSKQLAAHAAFVSHENNVLSLALAPEFEYLQSTRSVADLTQGLTRLLGQA
PEVKIEARNIQVETLHERTYRQKSERQQLAEEAFMSDHVVQHLIYQQAAKVVTDSIHPYD
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcttgttctagctcgcaaatggcgccccaagcggtttgctgagctggtgggt
caagagcatgtggtccgtgcgctgagtaatgcattggaaagtggccgtctccatcacgcc
tttctgtttactggcacccgtggtgtaggcaaaacgacgattgcgcgtatcttcgctaaa
tcattgaactgcgagcagggtaccagtgccgatccatgtggccggtgtacagcctgcttg
gatattgatgttggtcgctatattgacttgctggagatcgacgctgcctccaataccggt
gtggatgatgtgcgcgagatgatagaaaacgcgcaatacatgccctccagaggcaagttt
aaggtctacctaattgatgaggtgcatatgctctctaaagcagcgtttaacgcgctgctg
aagacgctagaggagccaccgccacacgtaaaatttcttctggcaacgactgatcctcag
aaattgccggtgactgtgttgtctcgctgcttgcagttcaacttgaagcgcttggatgag
gaacagatccagcgtcaaatcgccaagatcctcactgctgagcagatcacagccgacgat
gcggcgatcatagagctttccaaggctgctgacggttcattacgcgatggtttgtctttg
ctggaccaggccattgcttatgctggagggacgttacgcgagggggcagtacgtgacatg
ctcggtacggttgatcgtactcaggttgaggtgatgttggctgcattaatcgcaggtgac
ggtgatcgactattgcgggtgatagcaaccttggctgagttttcgccggactggggcggg
gtgttggaggccttggctgaagctttgcacaggattcaggtacagcaactagtgccttcg
gtggtgtttgcaggtgatggattaaatgttgccttattggctgaacaaacacagccggag
gttgtgcaactttggtaccagatggcaatcaatggacgtcacgacttacatttggcaccg
agtccacgtgtaggatttgagatggcagtgctgcggatgctcgctttccgacctgttcct
atggttgcaccgggtatggtttcgactgaggggcagagtgttaatgccccactaatggcg
tctgttggtaaggatgcacatggggctaatggatatacgatgtcccaatccccttctgat
ctccagaaagtccgagttggttcgttggatgggaagatcactgatgttgggcaatggctt
gcgttggtcgagcgcattgagttaagtggtccttctaagcaattggctgctcatgctgct
tttgtctctcatgagaacaacgtcctgtctttagccttagcccctgagtttgaatatcta
cagtcgacacgttctgtggccgatttgacccaggggttgacccggttgctgggtcaggcc
cccgaagtgaagattgaggccagaaacattcaagttgaaactcttcatgagcgcacctat
cgtcagaagagtgagcgccaacagttggccgaagaagccttcatgagcgatcatgtggtg
cagcatctgatctatcagcaggctgccaaagttgttaccgattccatacacccttacgat
gagtaa
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integrated database retrieval system
