Xylella fastidiosa Temecula1: PD_0003
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Entry
PD_0003 CDS
T00113
Symbol
recF
Name
(GenBank) DNA replication and repair RecF protein
KO
K03629
DNA replication and repair protein RecF
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PD_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_0003 (recF)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PD_0003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
ABC_tran
DUF2813
Motif
Other DBs
NCBI-ProteinID:
AAO27911
UniProt:
Q87FC4
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All DBs
Position
3153..4247
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AA seq
364 aa
AA seq
DB search
MHITQLVLRHFRCFDVVDFFPLPGLNFFIGENGSGKTSLLEAVHLMGYGRSFRGRVRDGL
IRHGSENLEIFVDWQETALINARRRRAGLSHYGQEWIGRLDGQKIMHLASLCAALAVITF
ESSSYQLINSNAELRRRFLDWGLFHVEPDFLDLWRRYTHVLKQRNSLLKQKEELAMLEAW
DQKLSEVGEQLTFRRFQYLERLKQRVIPLISRITPNLKIHGFNFNHGWRRHELPLIDALF
ISRERDYQYGYTSLGPHRSDWTPQFSSIPGVHFLSRGQGKLITLMCLLAQAQDFFDQRGE
WPILALDDLASELDQKHQWRVLEMLAEIPAQVLITGTEIPQGLKPFFSVGAMFHVEHGAI
TRMF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcactcagctcgtcttacgtcattttcgttgttttgatgtcgttgatttcttt
ccattacctggactgaattttttcattggtgaaaatggttcaggtaagactagtttactt
gaagccgtacatttaatgggttacgggcggagctttcgcggcagggtccgtgatggtttg
atccgacatggctctgaaaatctagaaatttttgtggattggcaagaaactgctttaatt
aatgcacgtcgacgtcgtgcaggtttaagtcactatgggcaagaatggataggacgttta
gatggtcaaaagataatgcatttggctagtttatgcgctgcattagcagtgattactttt
gaatcaagtagttaccaactcatcaatagtaacgccgaattacgacgtcggttcttggat
tggggattattccatgttgaaccagattttctggatttatggcgtcgctatacacatgtg
cttaaacaacgtaattctttacttaagcagaaagaagaattagccatgttagaagcttgg
gatcaaaaattgagtgaagttggtgaacaattgactttccgtcggtttcaatatttggag
agattgaaacaacgagtgatccctttaatttcaagaataacacctaatttaaaaatccat
ggttttaattttaatcatggatggcgtcgtcacgaattgccgttgattgatgctttattt
atttcgcgtgaacgtgattatcagtatggttatacttcattaggaccgcatcgttcggat
tggactccgcaattttccagtattcctggagttcattttttatctcgtggacaaggaaaa
cttataacattgatgtgcctactagctcaggcgcaggacttttttgatcagcgtggggag
tggcctattcttgctttagatgacttggcttcagaattggatcagaaacatcaatggcgc
gtgttagagatgctagctgaaattccagcccaggtcttgatcacggggacagaaattccc
caaggactcaagccttttttctcagtgggtgctatgtttcacgtggaacatggcgctatc
acgcgaatgttttga
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