Xylella fastidiosa Temecula1: PD_0185
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Entry
PD_0185 CDS
T00113
Symbol
pcnB
Name
(GenBank) polynucleotide adenyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PD_0185 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xft03019
]
PD_0185 (pcnB)
Enzymes [BR:
xft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PD_0185 (pcnB)
Messenger RNA biogenesis [BR:
xft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PD_0185 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AAO28077
UniProt:
Q87EW2
LinkDB
All DBs
Position
234920..236104
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AA seq
394 aa
AA seq
DB search
MLCIVPRGHHTISRKDISPNALRVLYRLREAGFGAYLVGGAVRDLLVGGHPKDFDLATDA
TPEQIKQLFRSCRLIGRRFRLAHVVFGREIIEVATFRANSDDGSGDRELENGRLVCDNVY
GTIEDDATRRDFTCNALYYTIEDFSVRDYVGGFEDVQSRLMRLIGDPVRRYQEDPVRMLR
AVRLAAKLGFEIEAGTAEPISRMAGLLADVAPARLFEEVLKLFLSGHAVVSFEALEDFGL
IDVLFPESAKALRANRSGALRRVLIEGLHSTDKRVIKDEPVSPAFLFALLLWPGFCHALV
TLQLQGVQPEEAQRRAADRVTLHHLERVALPRRFSLPMQEIWLLQNRFISRQPKRVLRLL
EHPRFRAAFDFLVVRLAASAEHAADVEFWRVAQQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctttgcatcgtaccgcgtggacaccatacgatttcacgtaaggacattagtccgaat
gcgttgcgggtgttgtaccgcctgcgtgaggcaggttttggtgcgtatttggttggcggt
gcggttcgtgatttgttggtaggcggtcatcccaaagatttcgacttggctaccgatgca
acacctgagcagatcaagcagttgttcaggagttgtcgtttaatcggtcgccgctttcgt
ttggcgcatgtggttttcgggcgcgagattattgaggtcgctaccttccgtgccaatagt
gatgatggaagtggtgatcgtgagctggagaatggccgtttagtgtgtgacaacgtctac
ggtacgattgaggacgatgcgacccgtcgcgatttcacctgtaacgcgctttactacact
atcgaagatttttcagtacgtgactacgtcggtggttttgaggatgtccagtctcggctg
atgagattgattggcgatccagtgcgacgttatcaggaagatccagtgcgcatgctgcgt
gcggtgcgtttagcagcgaagctcggtttcgagattgaggctggtactgccgaaccaatt
tcacgtatggctggattgttggctgacgtggcgccagcccgtttgtttgaggaagtgctc
aagctatttctctcaggacatgctgtggtcagtttcgaggccttagaggattttggtctg
attgatgtgttgtttcccgagagcgctaaggcattgcgtgctaaccgtagtggtgcattg
cggcgggtattgatcgaagggctgcacagtactgataagcgggtgattaaagatgaacca
gtgtccccggcattcttgttcgcattgttgttatggcctggtttttgccatgcgttggtc
acgttgcaattgcagggtgtgcagccagaggaggcacaacgtcgtgcagctgatcgggtg
acgttgcatcatcttgagcgtgtcgctttgccgcgccgcttttctttgccgatgcaagag
atttggttgttgcaaaaccgttttatttcacgccaacctaagcgtgtcttacggcttctg
gaacatccgcgttttcgtgctgccttcgatttcctggtagtgcgtttggcggcttctgct
gagcatgctgcagacgtggagttttggcgtgttgcacaacagtag
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