KEGG   Xylella fastidiosa Temecula1: PD_0208
Entry
PD_0208           CDS       T00113                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
xft  Xylella fastidiosa Temecula1
Pathway
xft00521  Streptomycin biosynthesis
xft00523  Polyketide sugar unit biosynthesis
xft00525  Acarbose and validamycin biosynthesis
xft00541  Biosynthesis of various nucleotide sugars
xft01100  Metabolic pathways
xft01110  Biosynthesis of secondary metabolites
xft01250  Biosynthesis of nucleotide sugars
Module
xft_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:xft00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PD_0208 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PD_0208 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    PD_0208 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PD_0208 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    PD_0208 (rfbB)
Enzymes [BR:xft01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PD_0208 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: AAO28099
UniProt: Q87EU0
LinkDB
Position
265352..266413
AA seq 353 aa
MGLATWLVTGGAGFIGGNFVLQAISLGHRVINLDALTYAGHLETLAALDGCAEHLFVHGD
IGDRALVSRLLDTHRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGTLLLLEAVCGYWKAL
PEAARAAFRFLHVSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTYGL
PVLTTHCSNNYGPYHFPEKLIPLVITKALAGEPLPVYGDGRHVRDWLFVGDHCTALCAVL
AGGRVGETYNIGGQAERENLEVVRMICRLLDERRPRADGLSYQSQIVHVADRPGHDRRYA
IDTSKLVSELGWAPVYRFEQGLALTVDWYLQHQDWVRAVLQGRDRVEGLLTAV
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgggattggcaacgtggctcgtgaccggtggtgccggtttcatcggcggtaattttgta
ttgcaagcgattagcctcgggcatcgtgtgattaatcttgatgctctgacgtatgcgggt
catttggagacgctcgctgcgcttgatgggtgcgcggagcatctttttgttcatggtgat
attggcgaccgtgcgttggtgagccgtttgctggatacgcatcgcccggatgcagtgctg
aattttgctgctgagagtcacgttgatcgttcgattgatgctcccgctgcgttcattcag
accaatgtggttggcacgttgctgttgttggaggcggtgtgtgggtactggaaggcgttg
ccggaggcggcgcgtgctgcgttccgttttctgcatgtatccacagatgaggtttacggc
agtttgggggagacgggcgcatttacagagaggacggcgtatgcacctaattcgccttat
tcggcgtcaaaggccgcgtctgatcatttggtccgtgcgtttcaccatacgtacggattg
ccggtgctgaccacgcattgttcaaataactatgggccatatcattttccggagaagctg
attccgctggtcatcaccaaggcgttggcgggtgagccgttacctgtgtatggcgatggg
cggcacgtgcgtgattggctgtttgtcggcgatcactgtaccgcgctgtgtgctgtattg
gctggagggcgggtgggtgaaacgtacaatatcggggggcaggccgagcgtgagaatctt
gaagtggtccgcatgatttgccgtttgcttgacgagcgccgcccgcgtgccgatgggctg
agttatcaaagccagattgttcatgttgcagatcgtccggggcatgatcgccgttatgcg
atcgacacgtccaagttggtgagtgagttaggctgggcgccggtgtatcgctttgagcag
ggacttgcgctgactgtggattggtatttgcagcatcaggattgggtacgtgcggtgctc
caagggcgtgaccgcgttgagggcctactgactgcggtgtaa

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