Xylella fastidiosa Temecula1: PD_0352
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Entry
PD_0352 CDS
T00113
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00020
Citrate cycle (TCA cycle)
xft00190
Oxidative phosphorylation
xft00650
Butanoate metabolism
xft00720
Other carbon fixation pathways
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01120
Microbial metabolism in diverse environments
xft01200
Carbon metabolism
Module
xft_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xft_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xft_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PD_0352 (sdhA)
00650 Butanoate metabolism
PD_0352 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PD_0352 (sdhA)
00720 Other carbon fixation pathways
PD_0352 (sdhA)
Enzymes [BR:
xft01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PD_0352 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AAO28232
UniProt:
Q87EF9
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All DBs
Position
441564..443354
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AA seq
596 aa
AA seq
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MSAYTITEHKYDMVVVGAGGAGLRATFGLAHKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAVIELEHYGVPFSRTAQGKIYQR
PFGGMTTRYGEGPRAERTCAAADRTGHAMLHTLYQQALAHDARFMIEYFALDLIFDSEGL
CRGVLALDMAEGSLHLFRAHGVVLATGGYGRTYFSATSAHTCTGDGGGLVMRAGLPMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMIIE
IREGRGVGEHKDHILLDLTHLGPSMIQEKLPGIAESARIFAGVDVTKQPIPVLPTVHYNM
GGIPTNYHGEVVRKVGNDPDAVVPGLYAVGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCSETIKPNQPHKVLPSDSCDKALGLLDKLRHADGSTPTAVIRDTMQRTMQSDASVFRTS
KTLQEGCEKMNEIFALFDDVKVSDRSLVWNSDLIETYELHNLLLNALATINSAEQRKESR
GAHAHEDYPDRDDENWLKHTLVSVDEKGSCSFDYRPVHMYTLSKDVDVIPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttatacaattaccgaacacaaatatgacatggttgtcgttggtgctggcggt
gctggtctacgtgccacgttcggtttggctcataaaggcttacagactgtctgtctgaca
aaagtattcccgacgcgttcgcataccgtcgctgcgcaaggtggtatctccgctgcgctt
ggtaacatgggggaggatgattggcgttaccatttttatgacaccatcaaagggtcagac
tggctgggtgaccaggatgcgattgagtacatgtgccgtgaggcaatcccggctgtgatc
gaactagaacactatggtgttccgttctctcgtactgcacaaggcaagatttaccagcgg
ccatttggtgggatgacgacacgttacggtgaggggccgcgggcagagcgtacctgcgct
gcagctgatcgaaccggccatgcgatgttacataccttgtaccagcaagcattggcgcac
gacgcgcgtttcatgattgagtactttgcacttgatctgatcttcgacagcgagggtttg
tgtcgtggcgtgttggcgttggacatggccgagggatccttgcacctgtttcgtgcccat
ggagtcgtgttggcgaccggtggctacggtcgcacgtacttcagtgcaacttctgctcat
acctgtactggtgacggtggtggcttggtgatgcgtgccggtttaccgatgcaggatatg
gagtttgtgcagttccatcccacaggaatctatggggctggctgcctcatcaccgaagga
gtgcgtggtgagggaggaatcttgcgtaactctaacggggagcgcttcatggagcgctat
gcacctcactacaaggatctggcctctcgtgatgtggtgagtcgctcaatgattattgag
atcagggaggggcgcggcgttggtgaacacaaagaccatatattgcttgatttgactcac
ttgggtccgagcatgatccaagaaaaattgcctggcattgccgagagtgcgcgtatcttc
gctggcgtggatgtgaccaagcagccgattccagtgctgccaacagtgcattacaacatg
ggtggtattccaaccaattaccatggcgaagtggtgcgtaaagttggtaatgatcctgat
gcagtggtgccggggctatatgcggttggtgaagcggcctgtgtatcggtgcacggtgcc
aatcgtttgggatcgaattcgttgcttgatttggtggtattcggtcgtgcggttgccaat
cgttgttccgaaacaatcaaaccaaatcagccgcataaggtattgccctcggatagttgc
gacaaggcactgggcttgcttgataaacttcgccatgctgatggttccacgccgacagcg
gtgattcgtgacacgatgcaacgtaccatgcaatctgatgcttcggtgtttcgtacgagt
aagaccttgcaagaagggtgcgaaaagatgaatgaaatctttgccttgtttgatgacgtc
aaggtttctgatcgttcacttgtttggaattcggatttgatagaaacctacgagctccac
aatttgctgttaaacgcactggctacgattaactcggctgaacagcgcaaagagagccgt
ggtgctcatgcgcatgaagattatccagatcgcgatgacgagaattggttgaaacacaca
ttggtcagtgtcgacgaaaagggctcatgcagttttgactaccgccctgtgcacatgtac
acgctcagcaaagacgtggatgtgatacctcctaagccgcgcgtctattga
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