Xylella fastidiosa Temecula1: PD_0399
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Entry
PD_0399 CDS
T00113
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00220
Arginine biosynthesis
xft00240
Pyrimidine metabolism
xft00250
Alanine, aspartate and glutamate metabolism
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PD_0399 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PD_0399 (carB)
00220 Arginine biosynthesis
PD_0399 (carB)
Enzymes [BR:
xft01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PD_0399 (carB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AAO28279
UniProt:
Q87EB8
LinkDB
All DBs
Position
485919..489161
Genome browser
AA seq
1080 aa
AA seq
DB search
MPKRTDLRTILIIGAGPIVIGQACEFDYSGAQACKALRAEGFRVVLVNSNPATIMTDPDM
ADAVYIEPIHWRTVEKIITKEKPDALLPTMGGQTALNCALDLADHGVLEKYGVELIGAKR
EAIRMAEDRELFRVAMQEIGLECPKAEVAKSLERALEIQAKVGFPTIIRPSFTLGGTGGG
IAYNRQEFEEIIKRGLELSPVHEVLVEESVLGWKEFEMEVVRDASDNCIIVCSIENLDPM
GVHTGDSITVAPAQTLSDKEYQRLRDASIAVLRKIGVDTGGSNVQFGIDPQTGRVVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNEITGGKTPASFEPSIDYVVTKIP
RFAFEKFPQADARLTTQMKSVGEVMAMGRTFAESLQKAVRGLETGKVGLEPTGLDLSSED
DLVVLKRELKAPGAERLFYVADAFRAGFAVADVYALSYIDPWFLDQIEEIVAAEGRLVTD
GLGSIDGARLRQLKRIGFSDARIAQLTGTNEVAVRTLRRVLKVKPVYKRVDSCAGEFATG
TAYLYSTYEEECEAAPSDRRKIMILGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVN
CNPETVSTDYDTSDRLYFEPLTLEDVLEIVEVEHPVGVIVQYGGQTPLKLAKALEANGVP
VIGTSPESIDLAEDRERFQRLVQQLGLRQPPNCTARTADEALVLAREIGYPLVVRPSYVL
GGRAMEIVYSEADLARYVRDAVKVSNDSPVLLDRFLDNAVEVDVDIIADPEGQVLIGGVM
EHIEEAGVHSGDSSCSLPPYSLSAATQDDLRRQVIRLAQALNVIGLMNTQFAIQSNDDGS
DIVYLLEVNPRASRTVPFVSKATGVPLAKIAARCMTGKTLAEQSVTCEVVPAYYAVKEAI
FPFAKLQGVDPILGPEMRSTGEVMGVGRSFAAAFARAQEAGDIRAPQPGRAFVSVRDPDK
KRVLPVVLALVERGFGVVATAGTYAWLQQNGVACEVVNKVAEGRPHIVDLIKNGEIVYII
NTTEGRAAIADSFSIRREALQHCVTYSTTIAGAKALVNSLEFRGTGPVWSLQELHKELQV
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtactgaccttcgtaccatacttatcatcggtgctggcccgattgttatc
ggtcaggcttgtgagtttgactattctggtgcccaagcctgtaaggcgttgcgtgcggaa
ggcttccgtgtcgtcttggtgaacagtaacccggcgacgattatgaccgatcctgatatg
gccgacgctgtgtatatcgaaccgattcactggcggacggttgagaagatcatcaccaaa
gagaagccagatgcgctgttgccaacgatgggtggtcagacggctttgaactgcgccttg
gacttggccgatcacggtgtgctggagaaatatggtgtcgagttgatcggagccaagcgc
gaggcgatccgtatggctgaggatcgtgagttgtttcgtgtggcgatgcaggagatcggc
ttggagtgtccgaaggccgaagtggctaaaagtttggagcgagctttggagatccaggcc
aaagtcggttttccgacgatcatccgaccgagcttcaccctgggcggtaccggagggggg
attgcctacaatcgccaggagttcgaggaaattatcaagcgcggtctggagctttcccca
gtacatgaggtgctggtggaggagtccgtcctaggctggaaagagtttgagatggaggtg
gttcgtgacgcctcggacaattgcatcattgtctgttcaatcgagaatttggatccgatg
ggggtacataccggggattcgatcacggttgctccggcgcagacattgagtgataaggag
tatcagcgtttgcgtgatgcttcgattgcggtactacgtaagatcggtgtggatactggt
ggttcgaatgtacagtttggtattgatccacagaccggccgtgtggtggtgattgagatg
aatccgcgcgtgtcgcgttcttcagcgttggcttccaaagcgactggtttcccaatcgct
aagattgcggcaaaactggcggtgggctacacccttgatgagcttaagaacgagattacc
ggcggtaaaacgcctgcttcgtttgagccatccattgattacgtggtgactaaaatcccg
cgttttgctttcgagaagtttccgcaagcggatgcacgtctgactacgcagatgaaatct
gtgggtgaggtgatggcaatggggcggacctttgcagagtcgttgcagaaggcggtgcgt
gggctggagaccggcaaggttggcttggagccgactggtttggatttgagcagcgaagat
gatttggttgtcctcaagcgtgagttgaaagcaccgggggctgagcggctattttatgta
gccgatgcatttcgtgctgggttcgcagtcgctgatgtttacgcgttgtcttatatcgat
ccatggtttttggatcagattgaggagattgttgctgctgagggccgactggttaccgat
ggtcttggttcgatagatggggcacgtttacgtcagctcaagcgtataggtttctctgat
gcgcgtatcgcgcagttaaccggcacgaatgaggttgcggtgcgtacgttgcgccgtgtg
ctcaaggttaagccggtatataagcgtgtcgattcttgcgctggtgagtttgccactggc
actgcttacctgtattcaacatatgaggaagagtgtgaggctgcgccgagtgatcgccgc
aaaattatgatcttgggaggggggccgaatcgcattggccaaggcattgagtttgattac
tgttgcgtccatgccgctttggcgttacgtgaggatgggtttgaaaccatcatggtcaac
tgtaatccggagacggtatctacggattacgatacctctgaccgcctttactttgagcca
ttgacgttagaggacgtgttagaaatcgttgaggtcgaacaccctgttggagtgatcgta
cagtacggtggacagactcctctgaagctggctaaagcgttggaagccaacggtgtgccg
gtgatcggcacctctccggaatcgattgacttggccgaggaccgtgaacgcttccagagg
ctggttcagcaacttggtttgaggcagccgccaaactgtacggcgcgtaccgctgacgag
gcattggtattggcccgtgagattggttatcccctggtggtccgtccgagttatgtgctt
ggtggccgtgcgatggagattgtctacagtgaggccgatttggcgcgttatgtgcgtgat
gcggtgaaggtatccaacgattcgccagtgttgcttgatcgtttccttgacaatgcggtt
gaggtcgatgtggacatcattgctgatccggagggtcaggtactgatcggtggagtgatg
gagcacattgaggaggctggtgtccactcaggtgactcctcatgttccttgccgccctat
tcgttatcggccgcgactcaggacgatttacgtcgccaagtcatcaggttggcgcaggca
ttgaacgtcattggtttgatgaacacacagtttgcgatccaatccaatgatgatggtagt
gacatcgtctatttgctggaagtcaatccacgtgcttcgcgcaccgtgccgttcgtctct
aaagcgacgggggtgccgcttgccaagattgccgcgcgttgtatgactggcaagacattg
gccgagcaaagtgtgacttgtgaggttgtacctgcatattatgcggtgaaggaagcgatc
tttccgtttgctaaattacagggcgtggacccgattctcggtccggaaatgcgttctaca
ggtgaagtgatgggggtgggccgtagttttgccgcggcgttcgcccgcgcgcaggaagcc
ggcgatatccgtgccccgcaaccaggcagggcgtttgtttcggtgcgtgatcctgataaa
aagcgtgtgttgccagttgtcttggccttggtggagcgcggcttcggtgtggttgctact
gctggtacttatgcttggttgcagcagaatggagtggcctgtgaggttgtgaataaagtg
gccgaagggcgtccgcacattgtcgacttgattaagaacggcgagattgtttacatcatc
aatactacggaagggcgtgcggcgattgccgactctttctcaatccgtcgggaggcactg
caacattgtgtgacctactcgactactattgctggcgctaaggcgttggtgaattcactc
gagttccgcggtaccggcccggtttggtcgctacaggaactccacaaggagctgcaggta
tga
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