Xylella fastidiosa Temecula1: PD_0404
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Entry
PD_0404 CDS
T00113
Symbol
lysU
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PD_0404 (lysU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xft01007
]
PD_0404 (lysU)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xft03016
]
PD_0404 (lysU)
Enzymes [BR:
xft01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PD_0404 (lysU)
Amino acid related enzymes [BR:
xft01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PD_0404 (lysU)
Transfer RNA biogenesis [BR:
xft03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PD_0404 (lysU)
Prokaryotic type
Other AARSs
PD_0404 (lysU)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AAO28284
UniProt:
Q87EB3
LinkDB
All DBs
Position
494346..495866
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AA seq
506 aa
AA seq
DB search
MTEHLPASQVSFDENALIAERRAKLLALRAQGVAYPNDVKREHYAADVQAAFANVETWTA
ETLEASSHRVRMAGRLMAKRLMGKASFAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDVG
DIIAVEGGLTRTRTGELSVKVNVLRLLTKALRPLPDKWHGLTDVEQRYRQRYVDLIVTPE
SREIFIKRSKIIRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELYLRVA
PELYLKRLVVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIR
DTAQSVLGTTQVIWDGAQIDLGPIFRRWRMDEAVCHHNPEMSVAECTDRDALLLHCERLK
IKVKSSYGWGRLLLSIFEATVEHTLIQPTFITDHPVEISPLARESDIESGYTDRFELFIN
GKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADYIRALEYGMAPTGGLGIGV
DRLVMLLTGSTSIRDVLLFPYMRPER
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcatctccctgcgtcgcaggtgtcctttgacgagaacgcgctgattgccgag
cgccgtgcaaaacttttagcactacgtgcgcaaggcgtggcttatccgaatgatgtcaaa
cgcgagcattatgctgctgatgtgcaggcagcatttgccaacgtcgagacatggactgct
gagaccctggaggcgtcaagccatcgtgtacgtatggctggccgattgatggctaagcgt
ctcatgggcaaggccagctttgctcagattcaggacgagtctggccgcatccagctgtta
atacagagtaacgtgcttggtgaggacagctatgccgcattcaaggtgttggatgttggc
gacatcattgctgttgaaggaggattgacccgcaccagaacgggcgagctgtcggtcaag
gtgaatgttttgcgacttttgacgaaggcgttacgtccattgcctgacaagtggcacggg
ctgactgatgtggagcagcgctaccgccagcgctatgttgatcttattgtgactccagaa
tcgcgtgagatcttcatcaaacgctccaagatcattcgtgcgctgcgtacttggctggat
gcgcgtcttttcttggaagtagagacgccgatgatgcattacatcccaggaggtgctgcg
gctaagccgtttgtgacctaccacaatgccttggatttagagttatatctgcgcgtggcc
ccagagttgtatctcaagcgtttggtcgtgggtgggctggaacgggtttacgagattaac
cgcaacttccgtaacgagggggtgtcgacccggcacaaccccgaatttacgatgcttgag
ttatacgaggcctattccacctaccatgaggtcatggatctggctgagacgatgatccgt
gatactgcacagtctgtgctgggcacgacccaggtgatttgggacggtgctcagattgat
ctgggtccgatattccggcgttggcgcatggatgaggcagtttgccatcataatcctgag
atgagcgttgccgagtgtaccgatcgtgatgcattgctccttcactgtgagagactcaag
atcaaggttaaatcgtcctacggttggggtcgattgctcttgagtatttttgaggcgact
gttgagcatacgttgatccagccgaccttcattacggatcatccggttgaaatctctcct
ttagcgcgcgaaagcgacatcgaatcagggtataccgatcgcttcgaactgttcatcaat
gggaaggaaatcgccaacggtttctcggaattgaacgatccggaggagcaggcgatgcgc
ttccaaaagcaggttgaagccaaagaagggggggatgatgaggccatgtactacgatgcc
gactatattcgcgctttggagtatgggatggcgccaaccggagggttagggattggtgtt
gatcgactggtgatgctgctgaccggtagcacctcaatccgcgatgtgctgttattccct
tatatgcgtccagaacgttaa
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