KEGG   Xylella fastidiosa Temecula1: PD_0480
Entry
PD_0480           CDS       T00113                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
xft  Xylella fastidiosa Temecula1
Pathway
xft00230  Purine metabolism
xft00240  Pyrimidine metabolism
xft01100  Metabolic pathways
xft01232  Nucleotide metabolism
Module
xft_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
xft_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:xft00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PD_0480 (nrdA)
   00240 Pyrimidine metabolism
    PD_0480 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xft03400]
    PD_0480 (nrdA)
Enzymes [BR:xft01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PD_0480 (nrdA)
DNA repair and recombination proteins [BR:xft03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PD_0480 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN DUF5805
Other DBs
NCBI-ProteinID: AAO28355
UniProt: Q87E45
LinkDB
Position
575941..578433
AA seq 830 aa
MIPKEQFVAAIADSLPNPGHVAGSVPPVALSVFHPDEPEDEVPIPRQTAMMHTRAVEEAN
VSTWITKEAGNRRMPFDCARLECAIDTIHQEFPQLDVAEYKRAVFGFVERKDSVNADDLV
DLLIREAESRVDLTAPEWEYFAARLYLRRLYKRASRNRFYDASQKYGSFVGLQESLADRN
IYSNDILRSYSKEELIEAGQMIDPERDKLFTYNGLYLLATRYLATDTSRGVFELPQERWL
TIALYLMQDEYGPGKGGRERRMQLVGEAYWALSNLYMTVATPTLGNAGKINGQLSSCFID
TVDDSLQGIYDSNTDIARVSKHGGGVGAYLGYVRSSGSMIRGVANSSGGVVPWIKQLNNT
AVSVDQLGQRKGAIAVYLDIWHRDIEAFLDLRLNNGDQRLRAHDVFTSVCIPDLFMEAVE
RRGDWYLFDPYEVKRVKGWYLQDFYDEKRGDPNGSFRRKYEDVVADERISRKTVKAIDIF
KRIMVSQLETGNPFMFYRDEVNRKNPNKHVGMVYSSNLCTEILQNMTPTRLIQEMISGNQ
IVTTKHAGDFVVCNLSSINLGRAITVQADLLGADVLERLIPIQVRMLDNVIDLNLLPVPQ
ATITNQKYRAIGLGTFGWHHLLAQKAIHWNSQEAEQYSDALYERINYLTIRASMELAKEK
GTYAVFPGSDWQTGEYFRARDYNSPQWLELAAQVAVNGVRNAYMVAVAPNMSTAQIAGST
ASIDPIYSAFYYEEKKDYRRPVVAPGLSLDTWPYYEKGAYKLDQFASIRQNARRQRHVDQ
SLSFNFYVPSTIRASTLLDLHMTAWREGLKTTYYVRSNDIDISECEWCSS
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgattcccaaagagcaatttgttgcggctatcgctgattctttacccaatcctggccat
gtcgctgggtctgttccgcctgttgcgttatctgtcttccatcctgatgaaccggaggac
gaggtgcctatcccacgccaaactgccatgatgcatactcgggctgtggaagaagccaat
gtgtctacctggattaccaaagaagcgggtaaccgccgtatgccgttcgactgtgcgcgt
ttggagtgcgctatcgatacgattcaccaagaattcccacaattggacgtggctgaatat
aagcgcgcggtgttcgggttcgtcgaacgtaaggatagcgttaatgctgatgacttggtt
gatctgttgatccgtgaggctgagtcacgtgttgacctgactgcgccggagtgggagtac
ttcgctgcacgtttgtatctgcgtcgcttatacaagcgtgccagccgcaatcgcttctac
gatgccagccagaaatacggctcgtttgtcggtttacaggagagtttggctgaccgcaat
atctattccaacgatattttgcgcagctactccaaggaggagttgatcgaggctggtcag
atgatcgatcctgagcgcgataagctgtttacttataacggcttgtacttattggccaca
cgttacttggcgaccgatacttctcgcggcgtgtttgaattgccacaagaacgttggctt
accatcgccttgtatttgatgcaagacgagtatggccccggtaaaggtggacgtgagcgc
cgcatgcaactagttggcgaagcgtactgggcactgtctaacttgtacatgacggtggcg
actcccaccctgggcaatgccggaaaaatcaatggccagttgtcttcgtgcttcattgat
accgttgacgacagtttgcagggtatttacgactccaacaccgatattgcgcgtgtgtcc
aagcatggcggaggcgttggtgcttatttgggttacgtacgctcctctgggtcaatgatt
cgtggtgtagctaactcttctggtggtgttgtgccgtggatcaaacagctcaataacacc
gctgtctctgtggatcagcttggtcagcgcaagggtgcgattgcggtttatttggatatt
tggcaccgcgatattgaagcgttcttggatttgcgtctgaataacggagatcagcgttta
cgtgcccatgatgtgtttacctcggtctgcattcccgacttgtttatggaagcggtcgaa
cgtcgcggcgattggtatttgttcgacccatatgaggtgaagcgggttaaaggttggtac
ctgcaggatttctatgacgagaagaggggtgaccccaatggcagcttccgccgtaaatac
gaggacgttgttgctgacgagcgtatcagccgtaagacggtcaaggccattgacatcttt
aaacgcatcatggtcagccaattagagacgggcaatccattcatgttctaccgggatgaa
gtgaaccggaagaatcccaacaagcatgttggcatggtgtattcgtctaatctctgtact
gagatcctgcagaacatgacgccaacccggctcatacaggagatgatcagtggcaatcag
atcgttacgaccaagcatgctggtgatttcgtcgtgtgcaatctgtcttcgatcaatctt
ggtcgtgcaatcacggtacaggctgatttgcttggcgccgatgtattggagcgtctgatc
ccgattcaggtgcgtatgcttgataatgtcattgatctgaatctgttgcccgtcccacaa
gccacgattactaatcagaaataccgtgcgattggtttaggtactttcggttggcatcac
ttgctggcgcagaaggcgattcactggaattcgcaggaagctgagcaatacagcgacgcg
ttgtatgaacgcattaattacctgacgattcgagcaagcatggagttggctaaggagaag
ggcacctatgcagtgtttcccggcagtgactggcagaccggtgagtatttccgcgcgcgt
gactacaacagcccacaatggcttgaattagctgcccaagttgctgtcaatggcgtgcgt
aatgcctatatggtggcggtagcgccgaacatgagtactgcgcagattgccggttccact
gcgtcaatcgaccccatctatagcgcgttttactacgaagagaagaaggattaccgccgc
ccggttgtggcacccggattgtcgctggatacgtggccgtattatgaaaagggtgcttat
aagctcgaccagttcgcgagcatacgccagaatgcccgccgccagcgtcacgttgatcaa
tcgctcagtttcaatttctatgtgccaagtaccatccgtgctagcacgttgttggatctt
cacatgaccgcttggcgtgagggcttgaagacgacttactacgtgcgctctaacgacatt
gacatcagcgaatgcgagtggtgttcaagctga

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