Xylella fastidiosa Temecula1: PD_0560
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Entry
PD_0560 CDS
T00113
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00550
Peptidoglycan biosynthesis
xft01100
Metabolic pathways
xft01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PD_0560 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PD_0560 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xft01011
]
PD_0560 (mrdA)
Enzymes [BR:
xft01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PD_0560 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
xft01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PD_0560 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AAO28433
UniProt:
Q87DW9
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All DBs
Position
687358..689442
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AA seq
694 aa
AA seq
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MGVGSDPMSVHHPQAKHTYAEVEQFRRRALLSLFVVVVCLFGLVGWYFKLQVLDHEIYAT
RSDANRIKLHPVVPGRGMIYDRDGRLLADNVPAFRLDVMPDKVADMEAMLVELGKVIPLS
EDELERFHRERKVRRRFMPVTLKLRMSEEEMARFAVDRWRFPGVELEPYFTRRYLYSDLF
AHVIGYVGRIDEKDLETLNGGDAALTYIGKSGLERYYEQVLRGKIGYQQIETNVQGRAIR
SLGRVTAQAGADLRLSIDADLQRAMVAAFGQYEGAAVAMDPRSGEILGMVSLPSYDPNLF
VNGISHAQFNALNANPSRPQFNRLVSGGVAPGSTLKPLIALAGLDAGVRRPEDRILSTGM
FYLPGVNRGWGDSHRGGHGWTDLRKSIAQSVNTYYYKLALDLGIERFTDYMRRYGLGQLT
GVDLTGEISGILPSLEYKRKVRKQAWYQGDTVNVSIGQGDWKVTLLQLVRSVAGLASGHM
NRPHLVVAERAAFSQPWQVLPQPPSQPISSNPGHVQVVREGMIDTMRPGGTGYQAAIGAP
YSIAGKTGTAQVASRKGEAAVDPRNLPMHLRHRALFVGFAPADNPTIAVAVAVEGGGYGA
STAAPIARKIFDAWLLGKLPEGLEPLDSARGRTAIGLTQFDMTVAGVCEAGNRAALQLGE
IQVSVAGGMLNSTAMMPVAPRAPVTLDSLPEEDP
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcggaagtgatccgatgagcgtgcatcatccacaagcaaagcatacgtatgcc
gaagttgagcagtttcgccgccgtgctttgctgagcttgtttgttgtagtggtgtgtctg
tttggtttggttggctggtacttcaagttgcaggtgcttgatcatgagatctatgcgact
cgttctgacgccaatcggatcaaattgcatccagtcgtgccagggcgcggaatgatatat
gaccgggacggacgccttttggcggataacgtgcctgcattccgattggacgtgatgccg
gataaggttgccgacatggaagcaatgcttgttgaactgggaaaggtgatcccgctttca
gaggatgaactggagcgttttcaccgtgagcgtaaggtgcgtcgaagatttatgccggtg
acattgaagctgcgcatgagtgaggaggagatggcgcgttttgcagttgatcggtggcgt
tttcctggtgtggagttggaaccctatttcactcgccgttatctttatagcgacttgttt
gctcacgtgatcggctatgtcggtcgtatcgacgaaaaggacttggagacgctgaacggt
ggggatgctgcattgacctacatcggtaaatcgggcctggagcgctactacgagcaggtg
ttgcgtggcaagatcggttatcagcaaatcgaaacaaatgtgcaaggacgtgcgattcgc
agtctgggacgggtaacggcacaagcgggtgccgacttgcggttgtcgattgacgctgac
ttgcagcgtgcgatggtcgctgcgtttggtcaatatgaaggtgcggcggtggcgatggat
ccgcgcagcggggaaattctggggatggtgagtttacccagctacgatcccaatttattt
gttaatggcatttctcatgctcaattcaatgcgcttaatgcgaatccttcgcgaccgcaa
tttaaccgtttggtctctggcggcgtggctcctggttctacactcaaacccttgattgcg
ttggctggattggatgccggcgtgcgtcgtcccgaggaccggattctttccaccggtatg
ttctacctgcccggtgtcaatcggggttggggagattcgcatcgtggtggtcatggttgg
actgatttgcgtaaatcgatcgcacagtcggttaatacttactactataaattagcgttg
gatctgggcattgagcgcttcaccgactacatgcgtcgctatggcctcggtcagctcacc
ggggtcgatttgaccggagagattagcggtattctcccttccctcgaatataagcgtaag
gtgcgtaagcaggcttggtatcagggagatacggtcaatgtttcgattgggcagggagac
tggaaagtgaccctgcttcagttagtacgtagcgttgctggcttggccagtggtcacatg
aaccgcccgcacttggtggtggccgagcgtgccgccttcagccagccgtggcaggtgttg
ccgcaaccgccatcacagccaattagctcgaacccggggcatgtgcaggtggtacgtgaa
gggatgatagataccatgcgtcctggagggaccggctaccaagctgcgattggtgcacct
tattcgattgctggcaaaacaggcactgcgcaagttgccagccgtaagggggaggctgcc
gttgatccgcgcaacttaccaatgcatttgcgtcatcgtgcgttattcgttggttttgct
cctgctgataatccgacgattgcggttgcggttgcggtcgagggcggcgggtatggtgct
agcactgctgcacccattgcacgcaagatttttgatgcttggttgctaggcaagttgcca
gagggcttggagcctttggacagtgcgcgaggtcgtaccgcgattggtttgactcagttt
gatatgactgttgccggggtatgcgaagctggaaaccgtgctgccttgcaactgggagaa
atacaggtttcggttgctggtggaatgctaaattcaaccgccatgatgccggttgcgcca
cgtgcgccagtgactctcgactcattgccggaggaagacccttga
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