Xylella fastidiosa Temecula1: PD_0572
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Entry
PD_0572 CDS
T00113
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PD_0572 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_0572 (alkA)
Enzymes [BR:
xft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PD_0572 (alkA)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PD_0572 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AAO28445
UniProt:
Q87DV8
LinkDB
All DBs
Position
701692..702342
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AA seq
216 aa
AA seq
DB search
MAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIVAR
IEAVIGSTCLYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSMHHN
TIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKALCTR
GECWAPYRTYAGLYLWRIADFHEGERAVISDRSQDE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctatgattatctttaccactgcgaccctgggttgtcggggtggatgcagcgt
ctgggtccgttgccagctctgcggcgctggcgtcagccgttcaacgtagttgatgctctg
gccagagcgatcctgttccagcaactgagtggtaaagcggcttcaaccattgttgctcgt
attgaggctgtgattggtagcacctgcttatatgccgaaacacttgcgtgtattgatgat
gcgtgcttgcgtgcctgcggtgtctccagcaacaagattctggcgttacgcgatctgacg
cggcgtgaagtggcaggcgagcttcccagtgtgtggcagatggggtcaatgcaccataac
accatcgttgaaaaattaattccgattcgtggtattggtcgttggactgtggagatgatg
ctgatattccgtcttggccgtcccgatgtgctgccggtggatgatttaggggtacgcaag
ggtatccagcgtgtggatagccttgctttcgtcccgactccgaaggcgctatgtacccgc
ggcgaatgctgggcaccttaccgcacctatgccgggttatatctatggcggattgccgat
ttccatgaaggagaaagagcggtgatctctgatcgttcgcaggacgagtag
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