Xylella fastidiosa Temecula1: PD_0642
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Entry
PD_0642 CDS
T00113
Symbol
kpsF
Name
(GenBank) polysialic acid capsule expression protein
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00541
Biosynthesis of various nucleotide sugars
xft01100
Metabolic pathways
xft01250
Biosynthesis of nucleotide sugars
Module
xft_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PD_0642 (kpsF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xft01005
]
PD_0642 (kpsF)
Enzymes [BR:
xft01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
PD_0642 (kpsF)
Lipopolysaccharide biosynthesis proteins [BR:
xft01005
]
Lipid A
PD_0642 (kpsF)
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GFIT
Motif
Pfam:
SIS
CBS
Regnase_1_C
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AAO28513
UniProt:
Q87DP0
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All DBs
Position
complement(789309..790310)
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AA seq
333 aa
AA seq
DB search
MAVSLLQHNHLSDTALIASARRVIEIEREALTLLNERIGAPFVAACRLILNSHGRVISTG
MGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLL
PVLKRQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAV
ALLDARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKR
LGMTAIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARL
MEANKINGLIVVDPQQRAVGALNIHDLLHAKIV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcattactccagcacaatcacctcagcgatacagcgctgatcgcaagcgca
agaagggtgatcgagattgagcgtgaggcgctgacattactcaacgaacggataggcgca
ccatttgtggcagcctgtcggctgattctgaactcgcacggccgcgtgatcagcactggc
atgggcaaatccggacacattgcacgcaagatcgctgccaccttggcttcaacgggtaca
cccgcatttttcgtacatcccggcgaagctgggcatggcgaccttggaatgatcacggac
agcgatgtgatcctggcgttgtcctactcaggtgaatcagacgaagtacggatgctgctt
ccagtcctcaagcgtcaaggcaatccaatcattgccatgaccggccgcccccaatcaaca
ctggcacaggctgccgatgtgcatctggatgtcagtgtcaccaccgaagcctgcccactg
gatctagcgccaacctccagcacaaccacttcgctagtaattggcgacgcactcgcagtc
gcactattggatgcacgcggctttactgcggaagattttgcccgctcacaccccgctggc
cacctaggtcgacgcctactactgcacattacggacgtgatgcacagtggtgatgacctg
ccagcagtacatgaggaagccacactgagcgaggcattactcgagatgactcgcaaacgt
ctgggcatgactgcaatcgttgacaacgagggccgactccagggagtgttcactgacggc
gacttgcgccgtgctctggacagcaacattgatgtaagaaacgcgcgcatcaacgaagtc
atgacccgccatcccaaaacaatcaatgccgaccaactcgcggccgaagctgcacgattg
atggaagccaataaaatcaatggtttgattgtggtcgatccgcaacagcgtgcggtaggc
gccctgaacattcacgacctgctgcacgccaaaattgtttaa
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