Xylella fastidiosa Temecula1: PD_0698
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Entry
PD_0698 CDS
T00113
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00300
Lysine biosynthesis
xft00470
D-Amino acid metabolism
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01120
Microbial metabolism in diverse environments
xft01230
Biosynthesis of amino acids
Module
xft_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PD_0698 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PD_0698 (dapF)
Enzymes [BR:
xft01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PD_0698 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AAO28569
UniProt:
Q87DI4
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All DBs
Position
854837..855664
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AA seq
275 aa
AA seq
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MHFTKMQGAGNDFVVLDLRDGTPPPDAALVAWLADRHFGIGCDQVIAIEPPRGVGVFAAY
RIWNADGSAAQQCGNGARCVAAWLVRDGSVATEHFLIDSPVQTHSVRCIGKDEYAVEMGL
PVFEPERIPLSGFPNALGEYVLSLQGEVLCCGAVSMGNPHAVVEVDLIDVAPVERIGPLL
QQHSAFPESVNVSFVQVIDPGLVRLRVYERGAGETLACGSGACAAAVVLMQRGRVGRDVR
VVLPGGTLRVQWPVSGGPVTLSGPARCVFDGVWYG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgcatttcaccaagatgcaaggggctggtaatgacttcgtcgttttggatttgcgtgat
gggacaccgccgccggatgcggcgttggtcgcttggttggctgatcgccactttggtatt
gggtgtgatcaggttatcgctattgagccgccgcgtggtgtcggggtgtttgccgcttac
cgtatctggaatgcggatgggtctgcggcgcagcaatgtggtaatggtgcacgttgcgtc
gctgcttggttggtgcgtgatggttccgttgcgaccgagcatttcttgattgacagtccg
gtacagacgcattcggttcgctgcataggtaaagatgagtatgcggtggagatgggtctg
ccagtgttcgagcctgagcgtattcctttgtctggatttcccaatgccttgggagagtat
gtgttgtcgctacagggtgaggtgctgtgttgtggtgcggtatcaatggggaatccgcat
gcagtggttgaggtcgatttgattgatgtggcacctgtcgaacggatcgggccgctcttg
cagcagcattctgcgtttccggagtcagtgaatgtcagttttgtccaggtgattgatcct
ggtttggtacggttgcgtgtgtatgagcgtggtgctggagaaacgttggcgtgtggcagt
ggtgcttgtgcggcagcagttgtgctgatgcagcgtggcagggttggacgtgatgtgcgt
gttgttctaccagggggcacgttgcgtgtgcagtggccagtttccggtgggccagtgacg
ttgtctggtccggcaaggtgtgtgtttgatggagtgtggtacggatga
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