KEGG   Xylella fastidiosa Temecula1: PD_0719
Entry
PD_0719           CDS       T00113                                 
Symbol
rpoZ
Name
(GenBank) RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
xft  Xylella fastidiosa Temecula1
Pathway
xft03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:xft00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PD_0719 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xft03021]
    PD_0719 (rpoZ)
   03400 DNA repair and recombination proteins [BR:xft03400]
    PD_0719 (rpoZ)
Enzymes [BR:xft01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PD_0719 (rpoZ)
Transcription machinery [BR:xft03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PD_0719 (rpoZ)
DNA repair and recombination proteins [BR:xft03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PD_0719 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AAO28588
UniProt: Q87DG6
LinkDB
Position
complement(883270..883569)
AA seq 99 aa
MARITVEDCLEVVNNRFELVMMASKRARQLANGVPPLIENTNSEDKPTVMALREIAARKI
NSKMIDEIEKAERERAEREAMEWAAAEVVADEDMSKSDD
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcacgtatcactgttgaagattgcctggaagttgttaacaaccgtttcgaactggtc
atgatggcatccaaacgtgcccgtcagctcgctaacggtgtaccgccgctcattgaaaat
accaatagcgaagataagccgaccgtaatggcattacgtgaaattgctgcacgcaagatc
aacagtaagatgatcgacgagatcgagaaggccgaacgcgagcgggctgagcgtgaagct
atggaatgggccgccgctgaagtcgtcgctgacgaagatatgtctaaaagcgacgattga

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