Xylella fastidiosa Temecula1: PD_0719
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Entry
PD_0719 CDS
T00113
Symbol
rpoZ
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PD_0719 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xft03021
]
PD_0719 (rpoZ)
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_0719 (rpoZ)
Enzymes [BR:
xft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PD_0719 (rpoZ)
Transcription machinery [BR:
xft03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PD_0719 (rpoZ)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PD_0719 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AAO28588
UniProt:
Q87DG6
LinkDB
All DBs
Position
complement(883270..883569)
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVPPLIENTNSEDKPTVMALREIAARKI
NSKMIDEIEKAERERAEREAMEWAAAEVVADEDMSKSDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtatcactgttgaagattgcctggaagttgttaacaaccgtttcgaactggtc
atgatggcatccaaacgtgcccgtcagctcgctaacggtgtaccgccgctcattgaaaat
accaatagcgaagataagccgaccgtaatggcattacgtgaaattgctgcacgcaagatc
aacagtaagatgatcgacgagatcgagaaggccgaacgcgagcgggctgagcgtgaagct
atggaatgggccgccgctgaagtcgtcgctgacgaagatatgtctaaaagcgacgattga
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