KEGG   Xylella fastidiosa Temecula1: PD_0758
Entry
PD_0758           CDS       T00113                                 
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xft  Xylella fastidiosa Temecula1
Pathway
xft00010  Glycolysis / Gluconeogenesis
xft00020  Citrate cycle (TCA cycle)
xft00260  Glycine, serine and threonine metabolism
xft00280  Valine, leucine and isoleucine degradation
xft00310  Lysine degradation
xft00380  Tryptophan metabolism
xft00620  Pyruvate metabolism
xft00630  Glyoxylate and dicarboxylate metabolism
xft00640  Propanoate metabolism
xft00670  One carbon pool by folate
xft00785  Lipoic acid metabolism
xft01100  Metabolic pathways
xft01110  Biosynthesis of secondary metabolites
xft01120  Microbial metabolism in diverse environments
xft01200  Carbon metabolism
xft01210  2-Oxocarboxylic acid metabolism
xft01240  Biosynthesis of cofactors
Module
xft_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xft_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xft_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xft_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xft00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PD_0758 (lpd)
   00020 Citrate cycle (TCA cycle)
    PD_0758 (lpd)
   00620 Pyruvate metabolism
    PD_0758 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    PD_0758 (lpd)
   00640 Propanoate metabolism
    PD_0758 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PD_0758 (lpd)
   00280 Valine, leucine and isoleucine degradation
    PD_0758 (lpd)
   00310 Lysine degradation
    PD_0758 (lpd)
   00380 Tryptophan metabolism
    PD_0758 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PD_0758 (lpd)
   00670 One carbon pool by folate
    PD_0758 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xft04147]
    PD_0758 (lpd)
Enzymes [BR:xft01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PD_0758 (lpd)
Exosome [BR:xft04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PD_0758 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C GIDA HI0933_like DAO FAD_binding_3 FAD_binding_2 3HCDH_N FAD_oxidored Lycopene_cycl Thi4 Pyr_redox_3 NAD_binding_8 2-Hacid_dh_C XdhC_C Xan_ur_permease DUF1411
Other DBs
NCBI-ProteinID: AAO28627
UniProt: Q87DC7
LinkDB
Position
complement(934373..935809)
AA seq 478 aa
MSEHYDVVVIGAGPAGYHAAIRAAQLGLKVACVDAALGKDGKPALGGTCLRVGCIPSKAL
LDSSRQYWNMGHLFNEHGISFKDAKMDIATMIARKDKIVKQFTGGIAMLFKANKITPYYG
FAQLQPGNVVKVKQHEGKNIELKGANVILASGSDSVELPFATFDGETIVDNIGALDFTKV
PKRLAVIGAGVIGLELGSVWKRLGAEVTILEAMPNFLAAVDADVAKTAAKEFKQQGLDIK
LGAKVSRTEISSKNNKKEVIVTYTDASGKQTLTVDKLLVAVGRKAATKGLLADGTGVQLN
ERGQIVVDEHCHTGVDGVWAIGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNFETIPWV
IYTEPEIAWVGKTEQELKADNIPYKAGSFPFAAVGRAVAMAEPSGFAKVLAHAETDRVLG
LHLIGVNVSELVHEGVLAMEFSGSADDLARICHAHPTLSEAIHDAAMAVSKRSIHKAN
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagtgaacattacgacgtcgttgttatcggagccggtccagctggctatcacgctgca
atccgcgccgcccaactgggtctgaaggtcgcttgcgtcgatgcagcactcggcaaggac
ggtaagccagcgcttggaggcacgtgtctacgcgtgggatgcatcccttccaaagcactg
ctggactcttcccgccagtactggaacatgggacatctattcaacgaacatggcatcagt
ttcaaagatgccaagatggatattgccacgatgatcgcccgcaaagacaaaatcgtgaaa
cagttcaccggtggcattgcgatgctcttcaaagcaaacaaaatcactccctactatgga
tttgcccaattgcaacctggcaacgtggtcaaagtgaaacaacacgagggtaagaacatc
gaactgaaaggcgccaacgtgatcctggcatcaggctcggattccgttgaactgccattt
gcaacgttcgacggtgaaacgattgtcgacaatatcggtgccctggactttacaaaagtc
ccaaaacgcttggcggtgatcggtgccggagtcatcggtctggaattaggcagcgtatgg
aaacgcctaggtgcggaagtcactattcttgaagcaatgccaaactttctagctgcagtt
gacgccgatgtcgccaaaaccgccgccaaggaattcaagcaacaggggctggacattaaa
ctcggcgctaaggtctcccgaaccgaaatttcaagtaaaaacaacaaaaaagaagtcatc
gttacctacactgacgcctccggtaagcagacactcactgtcgacaaactattagtggct
gtcgggcgcaaggccgcaaccaagggattgcttgcagatggcacgggggtacagctcaac
gaacgtggccagatcgtggtggacgaacactgtcataccggtgtcgacggtgtctgggcc
attggcgactgtgtacgcggcccgatgttggctcacaaaggcttcgaagaggggatcgca
gtagctgaattgatcgcgggcctgccaggccatgtgaactttgaaaccatcccatgggtc
atctacacagagccggaaatcgcctgggttggtaagactgagcaagaactcaaagcagac
aacattccttacaaagctggatccttcccgttcgccgcagtcggtcgcgccgttgcgatg
gccgagccatctggttttgcgaaagtcctagcacatgcagaaactgatcgcgtgttaggt
ttacatctgatcggtgtgaacgtctccgaattggtacatgaaggggtattggctatggaa
tttagtggctcagctgacgatctcgcacggatctgccacgcccacccaaccttatcggaa
gcaatccacgacgcagctatggcggtcagcaagcgctcaatccataaagcaaactga

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