Xylella fastidiosa Temecula1: PD_1081
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Entry
PD_1081 CDS
T00113
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PD_1081 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_1081 (mutS)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PD_1081 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
CcmD
Motif
Other DBs
NCBI-ProteinID:
AAO28937
UniProt:
Q87CI8
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Position
complement(1280970..1283576)
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AA seq
868 aa
AA seq
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MREKPEGGKGMAEHTPLMKQYFAAKAEYPDLLLFFRMGDFYELFHQDARKAARLLDITLT
QRGSSGGTPIPMAGVPVHAYEGYLARLIALGESVAICEQIGDPGLAKGLVERKVVRIVTP
GTITEEALLEERRDTLLMALSRTKNCYGLAWADLAGGRFLVNEVDSEEALEAELARLEPA
ELLLPDEDAWPEYLQQRNGVRRRPPWLFDADSGRRKLLAFFKLHDLSGFGIENNPQATAA
AGALLGYIEETQKQRLPHLTSITMETVGEAITMNAATRRHLELDTRVDGESRHTLLGVLD
STVTPMGGRLLRRWLHRPLRLREVVRQRHAAVGSMIDSDLDNKLRETFRRLGDMERILTR
VALRSARPRDISTLRDSLSLLPRLRELLNASDSPRLRVLYAELGEHDSTASLLVKAVAEQ
PPLKLTDGGVIAPEYDVELDELRKLSNNADQFLIDLETRERESSGISTLKVGYNRVHGYY
IEISKGQADKAPVHYTRRQTLTNAERYITEELKAFEDKVLSARDRALAREKLLYEQLLDT
VGAQLEPLKRCAAALSELDVLVCFAERAQTLDWVRPELEHTSCLHIEGGRHPVVEAVREQ
RFEPNDLYLHPERRMLVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASRALIGPIDRIM
TRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALADAVARH
LAHINRCYTLFATHYFELTALAEETYEGGLSGIANVHFDAVEHSERLVFMHTVKDGPANR
SFGLQVAALAGLPAATVAQARRRLAELEQRGRESHVSEITQLELDAPQQCNLFASAPSAA
QEALVALHPDELTPKQALEALYRLKALL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaagcccgaaggtgggaagggcatggcagaacataccccactgatgaagcaa
tacttcgccgccaaggctgagtatccagacttacttttgttcttccgtatgggagatttt
tacgagctttttcatcaagatgcccgcaaggcagcgcggttactcgatatcactttgact
cagcggggtagttccggtggtactcctatcccaatggccggtgtacccgttcatgcctat
gaaggctatttggcgcggctcattgccctgggtgaatccgttgcgatttgcgaacaaatt
ggagatccagggcttgctaaagggttggttgaacgtaaggtggtacgcatcgtcactcca
ggtacgatcactgaggaggcgttactggaggagcgtcgcgacactctattgatggcctta
tcacgcactaaaaactgttatggcttggcttgggctgacttagccggtggccgtttcctg
gtgaacgaagtcgatagcgaggaggcattagaagccgaactcgcacgtctggagccagct
gagctgttactccctgacgaggatgcctggccagagtatctacagcagcgcaacggtgtg
cgtcgccgtcccccatggttgtttgatgctgacagcggccgccgtaaattactagcgttt
ttcaaactgcacgatttatccggcttcggtatcgaaaataatccacaagctactgcggcg
gcgggtgcacttcttggctacattgaggagacacagaagcagcgtctgccgcatctgact
tcaattacgatggagactgttggcgaagcgattacgatgaacgctgccacacgtcgccat
ttggagctggacacccgtgtggatggggagagccgccacaccctgcttggggtgctcgat
agtacggtgaccccgatgggcggacggttgctgcggcggtggctgcatcggccgctgcgg
ctgcgcgaggtggtaagacaacgtcatgccgccgttgggagcatgatcgatagcgatctc
gataacaaactcagggagactttccgtaggcttggcgacatggagcggattttgacccgc
gtggcattgcgctcagcacgtccacgtgacatctccacattacgggatagcctcagcctc
ctgccacgtttacgtgagcttctcaatgcatcggattcgccgcgcttgcgcgtgttgtac
gccgagctgggtgagcatgacagcaccgcgtctttattggtaaaagccgtcgcagaacag
ccacccttaaagctgactgatggcggtgtgattgccccagaatacgatgttgaattggac
gaactgcgtaagctctccaacaacgcggatcagttcttgattgatcttgagacacgcgag
cgtgaatccagtggtatttctacgctgaaagtcggttacaaccgtgtgcatggttactat
attgagatcagcaagggccaagccgacaaagcaccggtgcattacacgcggcgccagaca
ctgactaacgccgagcgctacatcacggaggaactgaaagcgttcgaagacaaagtatta
tccgcgcgtgatcgtgcgttggcgcgggaaaaattgttgtacgaacagctgctggacacc
gtcggggcgcaactggaaccgctgaagcgttgtgccgctgcgctatctgagctagatgta
cttgtctgctttgccgagcgcgcacagacattggattgggtgcgtccggagttggagcac
acatcatgcttgcatattgagggtggccgtcacccggttgtggaagctgtgcgtgaacag
cgattcgagccgaatgacctctatcttcaccctgagcgtcgcatgttggttatcaccggc
cccaatatgggaggcaagtcgacctacatgcgccagaatgccttgattgtcctgcttgct
tatatcggcagctacgttccggccagccgcgcgctgattggaccgattgaccgcatcatg
acccgtatcggtgctggtgatgacctggcccgaggtcagtctacatttatgcttgagatg
acagagaccagctacattctgcaccatgcgaccgcgcagtcgctggtactgatggacgaa
attggtcgggggacctcgacttacgatggcttggcgttggcggatgcagtcgcacgccac
ttagctcatatcaaccgttgttatacgctgtttgccacgcattattttgagctgactgca
ctagccgaggaaacatatgagggaggtctgagcggtatcgctaacgtgcatttcgatgct
gttgagcatagtgaacgcttggtcttcatgcacacagtgaaggatggtccggccaatcgc
agttttggcctacaggtggctgctttggctggtctaccagctgcgaccgtcgcacaggca
cggcggcgtttagctgaactggagcagcgaggccgcgaaagtcatgtttcagaaataaca
cagctggaattggatgcaccgcagcagtgcaatttatttgcgtcggcgccctcagcagct
caggaagcattggttgcattgcatcctgatgagttgacccctaagcaagcattagaagcg
ctctaccgactcaaagcgctgctataa
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