Xylella fastidiosa Temecula1: PD_1318
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Entry
PD_1318 CDS
T00113
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PD_1318 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xft01007
]
PD_1318 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xft03016
]
PD_1318 (serS)
Enzymes [BR:
xft01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PD_1318 (serS)
Amino acid related enzymes [BR:
xft01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PD_1318 (serS)
Transfer RNA biogenesis [BR:
xft03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PD_1318 (serS)
Prokaryotic type
PD_1318 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Cep57_CLD_2
CENP-F_leu_zip
tRNA-synt_His
IFT46_B_C
Motif
Other DBs
NCBI-ProteinID:
AAO29167
UniProt:
Q87BX8
LinkDB
All DBs
Position
complement(1546548..1547828)
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AA seq
426 aa
AA seq
DB search
MLDPTLLRQQLAKLAECLLTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIG
QARSKGEDVSALMAEVAAFSDDLKASEIALEEIRTELEKVALDIPNLPQQDVPLGADERD
NVEQARWGVPRTFDFAIKDHVELGACHGWLDAESAAKLSGARFTVLRGPIARLHRALAQC
MLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEHRRYLISTSEISLTN
LVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQDSEGE
HHRMTRCAETVLEMLGLPYRKILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNCGD
FQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVMENYQNADGSITVPEVLRPYMD
GLSRIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatccgactctactccgtcaacaacttgcgaaactcgctgaatgcttgttgact
gtacgcggtttcactcttgatgttgcagcccttgaagcattggaaagcgaacgtaaacgt
atccaggtgcatacccaagagttgcaatccctgcgtaacagtaaatccaaggcgattggc
caagccaggagcaagggtgaagatgtgtctgcgttaatggctgaggttgccgcttttagt
gatgatttaaaagcctcggagatagcgttggaggaaatccgtactgaattagagaaagtg
gccttggatattcccaatttgccacagcaagatgtgccgttgggtgccgatgaacgtgac
aacgtagagcaggcccgttggggagtgccacgtacgtttgattttgccatcaaggatcat
gttgaattgggtgcgtgtcatggttggttagatgccgagagtgctgccaagctatccggt
gcgcgtttcactgtattgcgtggccccattgcacggctgcatcgcgcactggcgcagtgc
atgcttgacttacatgttagccagcatggatacgaagaagtcaatgtcccaatcattgtc
aatgcagacagcttacatgggactggtcaactaccgaaatttgaagaggacatgttcagt
actcagctcggtgagcatcggcgctatttgatttcgacctctgaaatttcactgactaat
ttagtacgtaacgagattattgaggcggatcgcctgccgttgcgtatggttgcacactca
ttgtgtttccgttccgaggcaggcagcggtggtcgtgatacgcgtggcatgattcgtcag
caccagtttgagaaggtcgaattggtcagcgtatgtaaaccgcaagacagtgaaggtgag
caccatcgtatgactcgctgcgcagagacagtgttggaaatgctgggactgccctaccgc
aagatcctgctgtgtaccggtgatatgggatttgctgcgaccaaaacctacgacttggaa
gtttggctgccgtcgcagggaatgtatcgcgagatttcatcgtgttccaactgcggtgat
ttccaagccagacgcatgcaagcccgttggcgcaattctgtcaccggcaaaccggaattg
gtacacacactcaacggttctggtgtcgctgttggccgtgcgatgattgcggtgatggag
aactatcagaatgctgatggttcgattacggtgccggaggtgttgcgtccttacatggat
ggtttgagtcggattggttga
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