Xylella fastidiosa Temecula1: PD_1513
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Entry
PD_1513 CDS
T00113
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PD_1513 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_1513 (xseB)
Enzymes [BR:
xft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PD_1513 (xseB)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PD_1513 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
V-SNARE
KxDL
DUF6687
Motif
Other DBs
NCBI-ProteinID:
AAO29356
UniProt:
Q87BE3
LinkDB
All DBs
Position
complement(1758646..1758912)
Genome browser
AA seq
88 aa
AA seq
DB search
MPKRSPPDTSPVARFEQSLQELEQLVQNMETGALSLEQSLGAYERGIALYRECHQALEQA
QLRVRILSDPMHPDDGEPFDPSLVSTSQ
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgctccccgccagacacctcccccgttgcccgctttgaacagtctcttcaa
gaattggagcaactggtacagaacatggaaaccggagcactgagcttggaacagtccctt
ggcgcttacgaacgcggtatcgccctgtatcgtgaatgccatcaagccctggaacaagcg
caattgcgcgtccggatattgagcgatccaatgcacccagatgacggtgaaccgtttgat
cccagcctcgtgagtacatcccagtga
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