Xylella fastidiosa Temecula1: PD_1543
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Entry
PD_1543 CDS
T00113
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4-6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00520
Amino sugar and nucleotide sugar metabolism
xft01100
Metabolic pathways
xft01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PD_1543 (rfbB)
Enzymes [BR:
xft01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
PD_1543 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AAO29385
UniProt:
Q87BB5
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All DBs
Position
complement(1788835..1789824)
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AA seq
329 aa
AA seq
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MVDQAWILKCSYGVPMSGNNNRVLVTGGAGFLGSHLCEKLVASGHDVLCVDNFYTGSKDS
VINLIGHPKFELIRHDVTFPLYVEVDRIYNLACPASPVHYQHDPVQTTKTSVHGAINMLG
LAKRVKARILQASTSEVYGDPEIHPQLETYWGRVNPVGIRSCYDEGKRCAETLFFDYWRQ
HKLEIKVTRIFNTYGPRMHPNDGRVVSNFIVQALRGEPITIYGDGTQTRSFCYVDDLIDG
MLRMMESPKDFNGPVNIGNPTEFTMLQLAEMVLKLVGSISKIVFQPLPLDDPKQRQPDIT
LAKSQLGWEPKVSLEDGLRETIAYFRKRV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatcaagcttggattttgaagtgttcttatggagtacccatgtctggaaataac
aacagagtgctagtcaccgggggtgctggctttctgggatcccatctatgcgagaaattg
gttgcttccggtcacgatgtattatgtgttgacaatttttatacgggtagcaaggacagt
gtcatcaacctgattggtcaccctaagtttgaattgatacgccatgatgtcaccttccca
ctctatgttgaagtcgaccgcatttacaatcttgcttgtccggcatcgccagtgcattac
cagcatgatccagtgcagacgacaaaaaccagtgtgcatggtgcaatcaacatgttaggg
ctggccaagcgggtcaaggcacgtattcttcaagccagcaccagtgaagtgtacggcgat
ccagaaattcatccacaactcgaaacctattgggggcgtgtgaacccggtgggcatccgt
agttgctatgacgaagggaagcgttgtgcggagacactgtttttcgattattggcgccag
cacaagttagagatcaaggtcacgcgtatttttaatacctatggtccgcgcatgcatccc
aatgatggtcgggtggtgagtaacttcattgtgcaggcactgcgtggtgagccaatcacc
atctacggggatggtacccaaacgcgcagcttctgctacgtcgatgatctgattgatggc
atgttgcgaatgatggaaagtcccaaagattttaatggaccggtaaacattggtaacccc
actgagtttacgatgctgcagctggctgaaatggtccttaaattggtgggtagtatttca
aaaatcgtatttcaaccgctgcccttggatgatccgaaacagcgtcagccggatatcact
ttggctaaatctcaacttggctgggaacccaaggtctcgcttgaagatggcctcagggaa
accattgcttatttccgtaagcgtgtttag
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