Xylella fastidiosa Temecula1: PD_1653
Help
Entry
PD_1653 CDS
T00113
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PD_1653 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_1653 (recC)
Enzymes [BR:
xft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PD_1653 (recC)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PD_1653 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAO29493
UniProt:
Q87B07
LinkDB
All DBs
Position
complement(1917985..1921350)
Genome browser
AA seq
1121 aa
AA seq
DB search
MSQMMVTTDFRLYHSNALDVLAGLLAETLRSPVPGQSLLVPDTILIPQAAMRRWLQATLA
TTHGVVANLEFLTPGEFVARALDANLGAVPNALDTAVLHWRLYAALRDPALLTQPELAEL
HAYLADGDLFKPWTLAEALSAAFEKYQAWRCDWLLRWEAGADPDDPQAILWRHSVNGATH
RARRIHDYLNRYGSGTAPPPQGLPARLFIFATLNISPDVLRVLATQAQVGTLHFYLPTPT
KEYWGDAQPFTQRLHQPTDCVTQTGENRLLHTWGAAGRDFMTVLGNYEVVHPSGEITAYD
DPEQRPGTTLDEGGLRDSLLQRLHADLFHNRSAPVPAPLPAPRLEDPSLQFHACHTRLRE
LQVLHDRLRALLEPNSPEGQRFNPPLQPREIAVLAPDIDLYIPYLEAVFGGHAHSDPLPY
TLADASPLIDEPLAEVFLRLLDLPVSRFGLHEILDLLASLPMATLAGFDTQTLEILRSWL
TAAGARWGLDAAHRAEHQAPADDAYTWSFALDRLLLGHASGADADIAGVAAWPDLEGSML
TALDTLIRLLRVLANTRQRLSEALLPTQWRERLLSLLDALLPDIPTVPSGIQRPLERLRR
LIDTFATDATRAGVALPVPAEVVRMHFAALLADTDTRAPLLTGGISIGRMVPMRLLPFRV
ICLLGMNDGDFPRRDPAAGLNRLTAELGTAQRRPGDRSRRDDDCLLLLQLFSAAQDVFYV
SYLGVDPHDGSLREPSPLLTELLSTAATYHADPSTAAKTLLLRHSLQPFSPTAFGADGDP
RRFSYHPLWQAAAASIEGQRHPLAPWCPRRLPALPDPEPPLPLDSLRRFLSAPAEQFLQQ
RLGLRLPEPPQTTDECDPLWLPSHGLERHRLDTLIFASLLHENDDTLYPQLRARALLPSG
PLGQQQLQERIEHLRPYAQAFAHWRGTALPQSQCLEVMIDGIRLHAHIQDLYPHGIARLR
LGPPNGPAVLRHGLDWLLASAAGHPWPLVRFEDAGVAGLGPHLQPSLPSSQAQTALTLLL
RLRTAGLRQPLPFAPYSAWEYYTQRDTPERALQTARARWRGNDHQWGESNHAAIQLALRN
HDPFATPQTAAHFAQLATLIFDLLTTGQADPEPLTWLQLHP
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagatgatggtcaccactgactttcgcctataccactccaatgcactcgacgtt
ctggcgggattgctggccgaaacgttgcggtccccggtgccgggccagtcgttgttggtc
ccagacacaatattgattccacaagcggcaatgcggcgttggttgcaagccacgttggcc
accacgcatggtgtcgtggccaatctggaatttttgactccgggcgagttcgttgcccgt
gcattggatgccaatcttggtgccgtgccgaacgctttggatacggccgtgttgcattgg
cgactatatgcagcgttgcgcgatccagcattactgacgcaaccagagcttgctgaatta
catgcttacctggcagatggcgacctcttcaaaccttggacattggccgaagcactgagt
gcagcattcgaaaaataccaggcttggcgttgcgactggttgctacgctgggaggcgggc
gcagatccggacgatccacaggccatcctatggcggcatagtgttaacggtgccacgcac
cgcgcacgccgcatccacgactacctgaaccgttatgggtcagggacagccccccccccc
caaggactgccagcgcgactctttattttcgccaccctcaacatctccccagatgtatta
cgtgtcctggcgacccaggcacaggttggcacactgcacttttacctgccgaccccgacc
aaagaatattggggtgatgcgcaacccttcacgcaacgcttgcatcagcccaccgactgc
gtcacccagaccggagaaaaccgcctactccatacctggggtgctgccgggcgtgatttc
atgactgtgttggggaactacgaagtcgtccatccctccggcgaaatcaccgcatacgat
gatccggaacaacgtccaggcaccaccctggatgaaggcggcctgcgcgatagcctattg
cagcgcctgcatgcggatctattccataaccgttcggcacccgtccccgcccccttgccc
gcaccgcgtctggaagatcccagtctccagtttcacgcctgtcatacccgactacgtgaa
ctccaggtccttcatgaccggctccgtgccttgctggaacctaactcaccggagggacag
cgttttaaccctcccttacaaccgcgtgagattgccgtattggcaccggacatcgacctc
tacatcccctatctagaagccgtgttcggtggacacgcccatagcgaccccttgccatac
acactggctgatgccagcccactgattgatgaaccgttggctgaagtcttcttgcgtctc
ctcgacttgcccgtatcccgctttggcctgcacgaaatattggacctcctggccagcctg
ccgatggccacccttgctggctttgacacacagaccttggagatcctgcgaagctggctg
accgccgccggcgcacgttggggattggatgctgcccaccgtgccgaacaccaagcccca
gctgacgacgcctacacctggagctttgcactggaccgcctcctcctgggtcacgccagc
ggcgcagatgccgatattgctggcgtcgctgcttggccggatctggaaggcagcatgctg
accgcattagacaccctgatccgattactgcgcgtcctcgccaatacacgacaacgcctg
agtgaggccctattaccgacacagtggcgagaacgcctactgagcctgcttgatgcactc
ctgcctgacatccccaccgtaccatccggtatccagcgtcccttagaacgcttacgcaga
ctgatcgacaccttcgccaccgatgccacacgcgccggagtggccttacccgtgccagcc
gaagtcgtgcgtatgcactttgccgctttactagccgacaccgatacccgcgccccactg
ctcacaggtggcatcagtattggccgcatggttcccatgcgactgctccccttccgcgtc
atctgtttgttaggcatgaacgacggcgacttcccgcgccgcgatcctgcggctggcctc
aatcgcctcaccgccgaacttggcaccgcgcagcgtcgccctggtgatcgctcccgacgt
gatgacgactgcctcctacttctacagctattcagcgccgcccaagacgtcttctacgtc
agctaccttggcgttgatccacacgacggcagcctacgcgaaccctcaccgctgctcaca
gaactacttagcaccgcagccacctaccatgccgaccccagtacagcggccaaaacactg
ctactgcggcattcattacagccattctcccccaccgcctttggcgccgacggcgaccca
cgccgattcagctaccaccccttatggcaggccgccgccgcgagtattgaaggacagcgc
caccctctggccccctggtgtccccgccgactcccagcccttcccgaccccgaacccccc
ctaccactggatagcctgcggcgcttcttgagcgcccctgcagaacagttcctacaacag
cgcctgggcctacgcctgcccgaaccccctcagaccaccgatgaatgcgaccccctctgg
cttcccagccacggcctagaacgccatcgactcgacaccctgatatttgcctccctactc
catgagaatgacgacaccctctacccacaactacgcgcccgcgcattactcccctcaggt
cccttaggccaacagcaactccaagaacgcattgaacacctgcgcccctatgcccaagca
tttgcacattggcgcggtaccgccctcccacagtcccagtgccttgaagtaatgatcgac
ggcatccgtctccacgcacacattcaggacctctacccccacggaatcgcccgcctgcgc
ctgggcccccctaacggccccgcagtactgcgccacggattagattggctgctggccagc
gccgccggccacccctggcccctggtccgctttgaagatgcaggcgttgcgggcctaggt
ccccatctacagccatccttgcccagttcccaagcacagaccgcactgaccctactactc
cgcctgcgcacggctggcctgcgccagcccctaccctttgccccctacagcgcctgggag
tactacacccagcgcgacacccccgaacgtgccttgcagaccgcccgcgcccgttggcgt
ggtaacgaccaccaatggggcgaaagcaaccatgcagcgatccaattagcactgcgtaac
cacgatccctttgccaccccgcagaccgctgcccactttgcacagctcgcaacactgata
tttgacctactcaccaccggtcaggccgacccagaacccttgacctggctgcaactgcac
ccatga
DBGET
integrated database retrieval system
