Xylella fastidiosa Temecula1: PD_1750
Help
Entry
PD_1750 CDS
T00113
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00260
Glycine, serine and threonine metabolism
xft00460
Cyanoamino acid metabolism
xft00630
Glyoxylate and dicarboxylate metabolism
xft00670
One carbon pool by folate
xft00680
Methane metabolism
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01120
Microbial metabolism in diverse environments
xft01200
Carbon metabolism
xft01230
Biosynthesis of amino acids
xft01240
Biosynthesis of cofactors
xft04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PD_1750 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PD_1750 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PD_1750 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PD_1750 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PD_1750 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PD_1750 (glyA)
Enzymes [BR:
xft01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PD_1750 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAO29584
UniProt:
Q87AS2
LinkDB
All DBs
Position
complement(2036311..2037585)
Genome browser
AA seq
424 aa
AA seq
DB search
MFFSGVAMFPRDARLDMYDPELAKAIAAEVRRQEDHVELIASENYCSTLVMQVQGSQLTN
KYAEGYSGKRYYGGCEYVDIAEQLAIERAKKLFGADYANVQPHSGSQANQAVYFALLQPG
DTILGMSLAHGGHLTHGANVNVSGKLFNAVQYGVNAQGLIDYEAVESLALEHRPKMVVAG
FSAYSQKIDWARFRAIADQVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTSTTHKTLRG
PRGGIIVAQAPQEALVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVYQQQVVK
NAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDP
RSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADVTVIAAVREKVAAQCKKY
PVYR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttttccggagttgccatgttcccgcgtgatgctcgtcttgatatgtacgatccc
gagttggctaaggccatcgctgctgaagtgaggcgtcaggaggatcacgttgagttgatt
gccagtgaaaattattgcagtacgttggtgatgcaggtgcaggggagtcaactgactaat
aagtatgctgaagggtattctggaaagcgttactacggtggttgtgagtatgtcgatatc
gctgagcaattggcgattgagcgtgccaaaaaactgtttggtgccgattatgccaatgtg
cagccccatagcggttcacaagccaatcaagcggtgtactttgccttgttgcagccaggc
gatacgatcctcgggatgagcttggcgcatggcggtcacttgactcacggcgccaatgtt
aatgtgtctggcaagttgttcaatgcggttcagtacggagtgaatgctcaagggttgatt
gattacgaggctgttgaatcgcttgcgttagagcatcggccgaagatggttgtggcgggc
ttttcggcgtattcgcagaaaattgattgggcgcgcttccgtgccattgctgatcaggtg
ggcgcttacttgcttgttgatatggcacatgtggctggcttggtggcggctggtgtctat
ccgagtccgctgccgcatgcgcatgttgtgacttcgacgacgcataagacactgcgcggc
ccacgtggcggcattattgttgcgcaggctccgcaggaggcgttggttaagaagttgcag
tcgatagtgtttcctgggatccagggtggtccattgatgcatgtgatcgcggccaaagcg
gttgcttttaaggaggcgttggagcctgcgtttaaggtgtatcagcagcaggtggtgaag
aatgcgaaggcgatggctgggaccctcatgttacgcggctataagattgtctctggtggt
acagaaaatcatttgatgttggttgacatgatcggtagggatgtctctgggaaggacgct
gagggcgcattgggtcaggttcatatcactgtcaataagaatgcggtaccggatgatccg
cgctctccgttcgtaacctccgggttacgcttggggactccagcagtcacgacacggggt
taccaggagcaggattgtgtggacttagcgcactggattgctgatgtgcttgacgcgcct
gcagatgtgacggtcattgccgcagtccgtgagaaggttgcggcgcagtgcaagaagtat
cctgtgtatcgctga
DBGET
integrated database retrieval system