Xylella fastidiosa Temecula1: PD_1810
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Entry
PD_1810 CDS
T00113
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00010
Glycolysis / Gluconeogenesis
xft00020
Citrate cycle (TCA cycle)
xft00260
Glycine, serine and threonine metabolism
xft00280
Valine, leucine and isoleucine degradation
xft00310
Lysine degradation
xft00380
Tryptophan metabolism
xft00620
Pyruvate metabolism
xft00630
Glyoxylate and dicarboxylate metabolism
xft00640
Propanoate metabolism
xft00670
One carbon pool by folate
xft00785
Lipoic acid metabolism
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01120
Microbial metabolism in diverse environments
xft01200
Carbon metabolism
xft01210
2-Oxocarboxylic acid metabolism
xft01240
Biosynthesis of cofactors
Module
xft_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xft_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xft_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xft_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PD_1810 (lpdA)
00020 Citrate cycle (TCA cycle)
PD_1810 (lpdA)
00620 Pyruvate metabolism
PD_1810 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
PD_1810 (lpdA)
00640 Propanoate metabolism
PD_1810 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PD_1810 (lpdA)
00280 Valine, leucine and isoleucine degradation
PD_1810 (lpdA)
00310 Lysine degradation
PD_1810 (lpdA)
00380 Tryptophan metabolism
PD_1810 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PD_1810 (lpdA)
00670 One carbon pool by folate
PD_1810 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xft04147
]
PD_1810 (lpdA)
Enzymes [BR:
xft01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PD_1810 (lpdA)
Exosome [BR:
xft04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PD_1810 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
HI0933_like
NAD_binding_8
AlaDh_PNT_C
DAO
GIDA
FAD_binding_2
DUF478
FAD_binding_3
Biotin_lipoyl_2
Thi4
3HCDH_N
Lys_Orn_oxgnase
Amino_oxidase
MCRA
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AAO29644
UniProt:
Q87AL3
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All DBs
Position
2112647..2114458
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AA seq
603 aa
AA seq
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MTVIEIKVPDIGDYSKVPVIEVLVTVGDHLVKNQGILTLESDKATLEVPSMNNGIVKELK
VNVGDLLSQGDVILLLETEDTTAPPSPSNAATSDTTSPPPPSPQPAASKPTAPDQQHSDI
KCRMVVLGAGPGGYTAAFRAADLGLDTVLVERYPNLGGVCLNVGCIPSKALLHAAAVIDE
AAHASTFGIDFGKPKITLDTLREYKQNVVNKLTAGLAGMAKQRKVRTVTGIAHFVSPNTL
DITAADGSTQRLHFQQCIIATGSHPVKLPNFPWDDPRIMDSTDALELAEVPKKLLVVGGG
IIGLEMATVYNALGSHVTIVEFMDQIIPGTDKDLVKPLADRMKKQGIEIHLNTKASHVKA
DKKGITVSFEAPTQGTQPALKTSTYDRVLVAVGRTPTGNNIGAEKAGVNVTERGFIPVDR
QMRSNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAAETESGKHREWVARVIPSVAYTN
PEIAWIGITETEAKAKGLNIGVAKFPWVASGRAIGIGRTEGFTKLIFDEDTHRIIGGAIV
GVHAGDLLAEIGLAIEMGAEAEDISHTIHAHPTLSESIAMSAEVYDGTITDLYLPKKSAT
SAK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgattgaaatcaaagttcccgatatcggcgattacagcaaggtcccagtcatc
gaagtgctggttaccgttggcgaccacttggtcaaaaaccaagggatcctcacactagaa
tcagacaaagccaccttggaagtgccatcgatgaataatggcattgtcaaagaactgaaa
gtcaacgtcggcgatttgctttcacaaggcgacgtgatcctcctgctggagaccgaagac
accaccgcccccccctcaccaagcaacgcggcgacatccgacaccacctcaccgcccccg
ccatccccccaaccagccgcttccaagccgacagcacccgatcaacaacactccgacatc
aagtgccgcatggtcgtactcggtgccggtcccggcggctacaccgcagcattccgcgcc
gctgacctcggcttggatacagtgctcgttgaacgctatcccaacctaggtggcgtctgc
ctcaatgtcggctgcattccttccaaagcattactgcacgcagccgccgtcatcgacgaa
gctgcacatgccagcacctttggaattgattttggcaaacccaaaatcaccctagacaca
ctgcgcgaatacaaacaaaacgtagtcaacaaactgactgccggcttggccgggatggcc
aaacaacgcaaggtacgcaccgtcaccggcatcgcgcacttcgtctctcccaacacactg
gacattaccgctgctgacggcagcacccaacgactccatttccaacaatgcatcattgct
accggctcacacccagtgaagctaccaaacttcccttgggacgacccgcgcatcatggac
tccactgacgcactggaactggccgaagtgccaaaaaaactgcttgtcgttggtggcggc
atcatcggcctagaaatggctaccgtgtacaacgccctgggcagccacgtcaccattgtc
gaattcatggaccagatcatccccggcaccgacaaagatctagtgaagccactggcggac
cgcatgaaaaaacagggcattgaaatacacctgaacaccaaagcaagccacgtcaaagcc
gacaaaaaaggcatcaccgtctcattcgaagcacccacccaaggcacacaacccgcatta
aaaacatcgacctatgatcgcgtccttgttgccgtcggccgtacaccgacaggcaacaac
atcggcgctgaaaaagcaggcgtcaacgtcaccgaacgcggcttcatcccggttgatcgc
caaatgcgcagcaacgtaccccatatctttgccattggagacattgttggtaacccaatg
ctggcgcacaaagccacacatgaaggcaaactggccgccgaagtcgccgctgctgaaaca
gaatcaggcaaacatcgggaatgggttgcccgcgtgatcccatccgtggcctacaccaac
ccggaaattgcctggatcggtatcactgaaaccgaagccaaagcgaaaggactcaacatc
ggcgtcgccaaattcccctgggttgccagcggtcgcgccataggcatcggacgcactgaa
ggcttcactaaactcatcttcgacgaagacacacaccgcatcattggcggagcgatcgtc
ggcgtccacgcaggcgacctcttggctgaaatcggactcgccatcgaaatgggtgccgaa
gccgaagacatcagccacacaatccacgcacaccccacactgagcgaatcgattgccatg
agcgccgaagtctacgacggcaccatcaccgacttgtatctccccaaaaaatccgctact
tcagcaaagtaa
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