KEGG   Xylella fastidiosa Temecula1: PD_1810
Entry
PD_1810           CDS       T00113                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xft  Xylella fastidiosa Temecula1
Pathway
xft00010  Glycolysis / Gluconeogenesis
xft00020  Citrate cycle (TCA cycle)
xft00260  Glycine, serine and threonine metabolism
xft00280  Valine, leucine and isoleucine degradation
xft00310  Lysine degradation
xft00380  Tryptophan metabolism
xft00620  Pyruvate metabolism
xft00630  Glyoxylate and dicarboxylate metabolism
xft00640  Propanoate metabolism
xft00670  One carbon pool by folate
xft00785  Lipoic acid metabolism
xft01100  Metabolic pathways
xft01110  Biosynthesis of secondary metabolites
xft01120  Microbial metabolism in diverse environments
xft01200  Carbon metabolism
xft01210  2-Oxocarboxylic acid metabolism
xft01240  Biosynthesis of cofactors
Module
xft_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xft_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xft_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xft_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xft00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PD_1810 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PD_1810 (lpdA)
   00620 Pyruvate metabolism
    PD_1810 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PD_1810 (lpdA)
   00640 Propanoate metabolism
    PD_1810 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PD_1810 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PD_1810 (lpdA)
   00310 Lysine degradation
    PD_1810 (lpdA)
   00380 Tryptophan metabolism
    PD_1810 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PD_1810 (lpdA)
   00670 One carbon pool by folate
    PD_1810 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xft04147]
    PD_1810 (lpdA)
Enzymes [BR:xft01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PD_1810 (lpdA)
Exosome [BR:xft04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PD_1810 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored HI0933_like NAD_binding_8 AlaDh_PNT_C DAO GIDA FAD_binding_2 DUF478 FAD_binding_3 Biotin_lipoyl_2 Thi4 3HCDH_N Lys_Orn_oxgnase Amino_oxidase MCRA DUF5696
Other DBs
NCBI-ProteinID: AAO29644
UniProt: Q87AL3
LinkDB
Position
2112647..2114458
AA seq 603 aa
MTVIEIKVPDIGDYSKVPVIEVLVTVGDHLVKNQGILTLESDKATLEVPSMNNGIVKELK
VNVGDLLSQGDVILLLETEDTTAPPSPSNAATSDTTSPPPPSPQPAASKPTAPDQQHSDI
KCRMVVLGAGPGGYTAAFRAADLGLDTVLVERYPNLGGVCLNVGCIPSKALLHAAAVIDE
AAHASTFGIDFGKPKITLDTLREYKQNVVNKLTAGLAGMAKQRKVRTVTGIAHFVSPNTL
DITAADGSTQRLHFQQCIIATGSHPVKLPNFPWDDPRIMDSTDALELAEVPKKLLVVGGG
IIGLEMATVYNALGSHVTIVEFMDQIIPGTDKDLVKPLADRMKKQGIEIHLNTKASHVKA
DKKGITVSFEAPTQGTQPALKTSTYDRVLVAVGRTPTGNNIGAEKAGVNVTERGFIPVDR
QMRSNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAAETESGKHREWVARVIPSVAYTN
PEIAWIGITETEAKAKGLNIGVAKFPWVASGRAIGIGRTEGFTKLIFDEDTHRIIGGAIV
GVHAGDLLAEIGLAIEMGAEAEDISHTIHAHPTLSESIAMSAEVYDGTITDLYLPKKSAT
SAK
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgacggtgattgaaatcaaagttcccgatatcggcgattacagcaaggtcccagtcatc
gaagtgctggttaccgttggcgaccacttggtcaaaaaccaagggatcctcacactagaa
tcagacaaagccaccttggaagtgccatcgatgaataatggcattgtcaaagaactgaaa
gtcaacgtcggcgatttgctttcacaaggcgacgtgatcctcctgctggagaccgaagac
accaccgcccccccctcaccaagcaacgcggcgacatccgacaccacctcaccgcccccg
ccatccccccaaccagccgcttccaagccgacagcacccgatcaacaacactccgacatc
aagtgccgcatggtcgtactcggtgccggtcccggcggctacaccgcagcattccgcgcc
gctgacctcggcttggatacagtgctcgttgaacgctatcccaacctaggtggcgtctgc
ctcaatgtcggctgcattccttccaaagcattactgcacgcagccgccgtcatcgacgaa
gctgcacatgccagcacctttggaattgattttggcaaacccaaaatcaccctagacaca
ctgcgcgaatacaaacaaaacgtagtcaacaaactgactgccggcttggccgggatggcc
aaacaacgcaaggtacgcaccgtcaccggcatcgcgcacttcgtctctcccaacacactg
gacattaccgctgctgacggcagcacccaacgactccatttccaacaatgcatcattgct
accggctcacacccagtgaagctaccaaacttcccttgggacgacccgcgcatcatggac
tccactgacgcactggaactggccgaagtgccaaaaaaactgcttgtcgttggtggcggc
atcatcggcctagaaatggctaccgtgtacaacgccctgggcagccacgtcaccattgtc
gaattcatggaccagatcatccccggcaccgacaaagatctagtgaagccactggcggac
cgcatgaaaaaacagggcattgaaatacacctgaacaccaaagcaagccacgtcaaagcc
gacaaaaaaggcatcaccgtctcattcgaagcacccacccaaggcacacaacccgcatta
aaaacatcgacctatgatcgcgtccttgttgccgtcggccgtacaccgacaggcaacaac
atcggcgctgaaaaagcaggcgtcaacgtcaccgaacgcggcttcatcccggttgatcgc
caaatgcgcagcaacgtaccccatatctttgccattggagacattgttggtaacccaatg
ctggcgcacaaagccacacatgaaggcaaactggccgccgaagtcgccgctgctgaaaca
gaatcaggcaaacatcgggaatgggttgcccgcgtgatcccatccgtggcctacaccaac
ccggaaattgcctggatcggtatcactgaaaccgaagccaaagcgaaaggactcaacatc
ggcgtcgccaaattcccctgggttgccagcggtcgcgccataggcatcggacgcactgaa
ggcttcactaaactcatcttcgacgaagacacacaccgcatcattggcggagcgatcgtc
ggcgtccacgcaggcgacctcttggctgaaatcggactcgccatcgaaatgggtgccgaa
gccgaagacatcagccacacaatccacgcacaccccacactgagcgaatcgattgccatg
agcgccgaagtctacgacggcaccatcaccgacttgtatctccccaaaaaatccgctact
tcagcaaagtaa

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