Xylella fastidiosa Temecula1: PD_1935
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Entry
PD_1935 CDS
T00113
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xft
Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xft03032
]
PD_1935 (gyrA)
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_1935 (gyrA)
Enzymes [BR:
xft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PD_1935 (gyrA)
DNA replication proteins [BR:
xft03032
]
Prokaryotic type
DNA Topoisomerases
PD_1935 (gyrA)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PD_1935 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
AAO29765
UniProt:
Q87A93
LinkDB
All DBs
Position
complement(2273232..2275913)
Genome browser
AA seq
893 aa
AA seq
DB search
MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD
KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM
RYTESRMSRISHDLIADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT
NIPPHNLVESINACIALIDNPELDIDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV
RMRAKADIEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDGM
RIYIEVKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQILQAFIRHRREV
VTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLVG
TLLSASGGEASRPEDLPQGVGLIGDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQQL
LEIIVGLIRILESPDVLLQVIRDELLKIREEYGDVRRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTSTGKVFW
LSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPVREYAENHYVFFATRQGTVKKTPLS
EFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTVRSMGRTATGV
RGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTAESVHIDPTQDDILCILT
ATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVLLISDGGTLVR
TRGSEISRVGRNTQGVTLIRLSNGEKLQAVERLDASLSIPDETEDDPGTVHPA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgccaaggaaatcatcaaggtcaatctggaagacgagatgcgtaagagc
taccttgattatgcgatgagcgtaatcgtaggtcgtgcactccccgatgctcgcgatggc
atgaagcctgtgcatcgccgcgtcctgtacgccatgcatgaacttggtgctcacagcgac
aagtcctacttcaaatctgcacgtatcatcggtgaagttctcggtaagtaccatccgcat
ggtgatcagtctgtttacgacaccctggtacgtatggcgcaacccttctcgttgcgttac
ttactggtagagggtcaaggtaactttggttcggtggacggcgatcctgccgccgcgatg
cgttacaccgagtcgcgcatgtcgcggatcagccacgacctgattgctgacatcgataaa
gagaccgtcgacttccagcccaattacgacgaaaaagaaacggaaccaacggtcatgccg
acccggttcccgaatctattggtcaatggatcgtccgggattgcagtgggcatggccacc
aatatcccgccccataaccttgtcgaatccatcaacgcttgcattgcccttattgataat
ccagaactggatattgatggattgatggaatacatccccggtccggatttccccaccgcc
ggtatcatcaacggcaccgctggcattgttgctggctaccgtaccggccgtggtcgcgtc
cgcatgcgtgccaaggcggatattgaagttgccgacaatggtcgtgaagccatcgttgtt
actgagattccttaccaagtcaacaaagcacgtttgatcgaaaaaattgccgagctggtg
aaggaaaagagaatcgatggcatcagcgaactgcgtgacgagtccgacaaggacggcatg
cggatttatattgaagtcaaacgtggcgagtctgccgaggttgtcctcaacaacctctac
cagcagacccagatggagtcggtattcggaattaacatggtggcactggttgacggccgc
ccccaactactcaacctcaaacagatactgcaagccttcatccgtcaccgccgcgaagtg
gtcacccgtcgcaccatcttcgaactgcgcaaagcccgtgcccgtgcccacgtcctggaa
ggtttgacggttgccctggccaacattgacgagatgattcacctgatcaaaacctcgcca
agcccacaagaagcaaaagagcgcctgctcgccaaaacctgggcacctggattggtcggc
acattgctcagtgcctcaggtggtgaagcatcgcgcccggaagatctcccccaaggcgtg
gggctgattggcgactcctatcaattgactgaagtccaagtacgacagattttggaaatg
cgcctgcaccgcctcaccgggctggaacaggacaagcttgccgaagagtaccagcagctg
ctggagatcattgtcggcctgatccgcatcttggagagcccggatgtcctattacaggtc
attcgcgatgaactgctcaagatacgtgaagaatatggggatgtacgccgtaccgagatc
cgccatagcgaagaagacttagacatcctcgacctcattgcaccagaggatgtcgtcgtc
accctgtcccacgccggctatgccaagcgtcagcccgtgtcagcctaccgtgcccaaaag
cggggagggcgtggccgcgctgctgtgaccacaaaagaagaagacttcattgaccatctc
tggctggtcaacacccacgacaccctgttgaccttcaccagcaccggcaaagtattttgg
ctgtcggtgtaccaattgccagaggccggttccaacgcccgcggtcgccccatcatcaac
tggatccccttggagccaggcgaaaaagtgcaggccgtccttcccgtacgcgaatacgct
gagaaccactatgtgttttttgccacccgccaagggaccgtcaaaaagactcccttgagt
gaatttgcattccgcttagcgcgcggcaaaatcgcgatcaaccttgatcaaggagatgcc
ctgattggtgttgccctgaccgatggcgaacgtgatgtcctgctctttgcctccaatggc
aagaccgtgcgtttcagtgagaacactgtccgctcaatgggccgcaccgccacgggcgtg
cgcggtatcaaactgaccgaaggagaagaggtggtcagcctcatcattgccgaaccggca
actggcgtggatatgctcgaagaagcggaagaaaccgcagacgacgacatccagacagcc
aacactgccgagagcgtgcacattgatcccacccaggatgacatcctctgcatcctgacc
gccactgaaaacggctacggcaaatgcacccccctggcccattaccctcgtaaaggccgt
ggcactcaaggcgtcattggtatccagaccaccgagcgcaatggccgcctggttgctgcc
gtcctattaggtgccaccgacgaagtcctcttgatctctgatggcggcaccctggtgcgt
acccgtggctccgagatttcgcgcgttggccgtaatacccaaggcgtcaccctaatccgc
ttatccaatggtgaaaaacttcaggcagtcgagcgtttggatgcttccttgagtatcccg
gatgagacagaggacgatcccggcaccgtacaccctgcctga
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