Xylella fastidiosa Temecula1: PD_1942
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Entry
PD_1942 CDS
T00113
Symbol
smc
Name
(GenBank) chromosome segregation protein
KO
K03529
chromosome segregation protein
Organism
xft
Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xft03036
]
PD_1942 (smc)
Chromosome and associated proteins [BR:
xft03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
PD_1942 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
AAA_29
CENP-F_leu_zip
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAO29772
UniProt:
Q87A86
LinkDB
All DBs
Position
complement(2283681..2287184)
Genome browser
AA seq
1167 aa
AA seq
DB search
MRLSTIKLSGFKSFVDPATLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS
LTDVIFSGSSARKPVAQATVELIFDNSDHTISGEFAAFNEISVKRTVSRDGSSVYSLNGT
KCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEARPEDLRIYLEEAAGISKYKERRKET
ESRIRHTQENLDRLNDLREEIGKQLEHLKRQARQAEQYQTLQEERRVKDAECKALQFREL
DTRLQGLRQALLQEETRLQQLLAEQREAEMRIETSRVRREESAEALATAQADVYQVGATL
ARIEQQIQHQREMSQRLHKARDEAQKQLIDLTRHMGDDAATLAVLREAVENNEPQLHVLR
EQSEFKQDALRDAEAALTDWQQRWDSHNRETSEASRAGEVERTRVDYLDRQTLDAERRRD
LLLAERAGLDLDALAEAFEQIEVQYETQKAALDGLNDQLEQRKQTLADVQHQQRTAQTEL
ADVRKHAQTARGRLSSLETLQQAALGQEQGAAMTWLQAHGLSSAARVGERIRVESGWENA
LESALGHMIEGVLVDDPQTLVEALNSLNEGHIALVADTQTQIQVAPTSLAAKVQGPVAIR
RLLTHLHGAEDLVAARALQATLGEGDWVMTRNGECLGEGWLRVSRSGAAEQGALLRERDI
QTLRAQIETLQEREAELEHRLTHFRDHLLMAEQHREDAQRQLYIAHRGVSELAGQRQAHH
GKLEASRGRIQHIEAEIAQLLETLDTSRDQARTARATLDEAVTRMGDLESQRQALHAERQ
QLNLTRDQAREAARSVREAMHALALTLESQRTQMVSLSQTLQRMDNQRGQLDARLEELMN
QLSEGDSPVEILEQQHQAALSERVRTEHLLVQARTHLDGIDAELRQFEHTRQQRDEQALS
QRERISQCRLDQQALALGAEQRQAAVEKAGFVLQHLVDALPEAANPADWEAAIEQLDIRI
RRLEPVNLAAIHEYNEAAQRVEYLQAQHEDLTVALQTLEDAISKIDRETRGRFKETFDRV
NAGLQTLYPRLFGGGHAYLELTSEDLLDTGIAIMARPPGKRVSSISLLSGGEKAMTAVAL
VFAIFQLNPAPFCLLDEVDAPLDEANVGRLASMVKEMSEKVQFLFVSHNKSTMEAAQQLS
GVTMREPGVSRLVSVDLAEAARLVDGS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtccacgatcaagctgtccggtttcaaatcgtttgttgatcctgccacgctc
catctaccaaccaacatgaccggtatcgttggtcccaatggctgcggcaaatccaacatt
attgatgcggtgcgttgggtgatgggtgaaagctcagctagccggttacgaggcgattcg
ttgacggacgtgattttttccggatcttccgcccgtaaaccggtggcacaggccaccgtt
gagctgatctttgataacagcgaccacaccatcagtggagaattcgcggcattcaacgaa
atttcggtcaaacgtaccgtgagccgtgatggctccagcgtctactccctgaacggcacc
aagtgccgccgccgcgatattaccgacttgttcctaggcaccggcttggggccgcgcagc
tactccatcatcgaacagggcatgatcagtcagattatcgaagcgcgccctgaagatttg
cgtatctacctggaagaagctgccggcatatccaaatacaaagaacggcgtaaggagacc
gagagccgcatccgtcatactcaagaaaatctggatcgcctgaacgatttgcgtgaagaa
atcggtaaacagcttgaacacctcaagcgccaagcgcgccaagctgagcaatatcagaca
ttgcaagaagaacgccgtgttaaagatgccgagtgcaaggccttgcagttccgtgaactg
gacacccgtctccaaggattgcgccaggcattacttcaagaggaaacccgcttacagcaa
ttgcttgccgaacagcgtgaagccgagatgcggatcgaaacctcccgcgtgcggcgtgaa
gagtctgccgaagccttggcaaccgcacaggccgatgtctatcaagtaggtgccacactg
gcccgcatcgaacaacagatccaacatcaacgtgaaatgtcgcagcgtttgcacaaagca
cgcgatgaagcacagaaacaactgatcgacctgacccgtcacatgggtgacgatgccgcc
acactggcggtgttacgtgaggccgtcgagaacaacgaaccccagttgcacgtgctgcgt
gagcagagcgaatttaaacaagacgcactgcgcgacgccgaagcagcgttgacagactgg
cagcagcgttgggacagccacaaccgagagaccagcgaagcatcgcgtgctggtgaagtt
gaacgtacccgtgttgactacttggaccgtcagaccctggacgccgagcggcggcgtgac
ctattgcttgccgaacgtgccggacttgatctggacgcattggccgaagccttcgagcag
atcgaagtgcaatacgaaacccagaaagccgcactagacggcctcaacgaccaacttgaa
caacgtaaacagacattggcggacgtacagcaccagcagcgtactgcgcagaccgaactg
gccgatgtccgtaaacatgcccagaccgcccgtggtcgcctatcttcacttgagaccctg
caacaggccgcccttggccaggaacaaggtgccgccatgacctggttgcaggcccatgga
ttgagttcggccgcccgcgtaggagaacgtattcgtgtcgagagcggctgggaaaacgcc
cttgaaagcgcccttggtcacatgattgaaggcgtccttgttgatgacccgcagaccttg
gttgaagcattgaacagccttaacgaaggccacatcgcattggtggctgacacccagaca
cagatccaagtggcccccacatccctggccgctaaagtccagggacctgttgcgatccgc
cgtttactgacccatctgcacggcgctgaagatttagtcgctgcccgcgccctgcaagca
acactgggcgagggcgactgggtgatgacccgcaacggtgaatgcctgggtgaaggatgg
ctacgcgtatcccgttctggagccgctgagcaaggcgcattactgcgtgaacgtgacatt
caaaccctgcgcgcccagattgagaccctgcaagagcgcgaagctgaattggaacatcgc
ttgacgcacttccgcgaccacctattgatggccgaacagcaccgcgaagatgcacaacgc
caactctatattgcacatcgtggcgtctccgaactggccggccagcgccaggcccaccac
ggcaaactagaggcctcccgtggccgtatccagcacattgaagccgagattgcccagtta
ttagaaaccttggataccagccgtgaccaagcccgtactgcgcgcgccacactggatgag
gcagtcacccgcatgggtgacttagagagccaacgtcaggcattgcacgctgagcggcaa
caacttaacctgacccgtgaccaagcgcgtgaagccgcacgcagcgtccgtgaagctatg
catgccttagccttgaccttagagtcacagcgtacccaaatggtgtccttgagtcagaca
ttgcagcgcatggacaaccagcgcggccagctcgacgcacgcttagaagaactgatgaac
caactcagtgaaggtgattccccggtggagatcctggagcaacaacatcaggctgccctc
agcgaacgagtccgtaccgaacacctcttggtccaagcacgtactcatcttgacggcatt
gatgccgaactgcgccaatttgaacacacccgtcagcagcgcgatgaacaggccttgtcc
cagcgcgagcgcatctctcaatgccgccttgaccaacaggccctcgccttgggcgctgaa
cagcggcaggctgcggtggagaaagccggcttcgtcttacagcaccttgtggatgccctt
cctgaagctgccaacccagctgactgggaggccgcgatagaacaactggatatacgtatc
cgtcgtctggaacctgtcaatctggcggccattcacgagtacaacgaagccgcacagcgt
gtcgaatacctccaagcccaacatgaggacctgaccgttgccctacagacacttgaggat
gccatctccaaaatcgaccgtgaaacccgaggccgctttaaagagaccttcgatcgcgtc
aacgcggggttacagacactctacccccgtttatttggtggcggtcacgcctacctggag
ctgaccagtgaagatttactcgacaccggcatagcgatcatggcccgccccccaggcaag
cgcgtctccagcatctccttactgtctggcggtgaaaaagccatgacagcagttgcactt
gtgtttgccatcttccaactcaaccccgcacccttctgcctgctcgacgaagtggatgct
cccctggacgaagccaatgttgggcgcttggccagcatggtgaaagaaatgagcgagaaa
gtgcagttcctgtttgtcagccacaacaaatccaccatggaagccgcccagcaactgtcc
ggtgtcaccatgcgtgaacccggagtgagccgcctagtcagcgtggatttggccgaagcg
gcccgtttggttgacgggagctga
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integrated database retrieval system
