Xylella fastidiosa Temecula1: PD_1982
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Entry
PD_1982 CDS
T00113
Symbol
rluC
Name
(GenBank) pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
xft
Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xft03009
]
PD_1982 (rluC)
Enzymes [BR:
xft01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PD_1982 (rluC)
Ribosome biogenesis [BR:
xft03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PD_1982 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AAO29811
UniProt:
Q87A49
LinkDB
All DBs
Position
complement(2329409..2330401)
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AA seq
330 aa
AA seq
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MTDPFRSQSESVVECFSVRIVVVPAEHSGQRLDNFLLSKLKGVPRSLIYKLVRSGQVRVN
GGRVKAERKLDGGDEVRLPPLRLIQDRAIVAPSAAFLARMEAAIVFEDARLLALNKPSGM
ASHGGSGISYGVIEAMRILRPKQELELVHRLDRDTSGLLIMAKKRAVLIELQALMREASV
NGKEGRGIAKRYLTLLSGRMPNGVMSVDAPLHINLRHGGERHVRVHHDGKPSKSRFRLLE
RRGGQSYCEVLIETGRTHQIRVHAQHLGHPVTGDDKYGDQEVNRKLRDQIGLQRLFLHAV
SLEFALDAGSTPYVLNAPLAEDLVAALDRL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccatttcgttcccagtcagagtctgtcgtggagtgtttcagcgtacgtatc
gttgtcgtgcctgccgagcacagtgggcagcgcttggataattttcttctcagcaaacta
aagggtgtcccgcgcagcttgatttacaagctggtgcgcagtgggcaagtcagagtgaat
ggtggtcgtgtcaaggccgagcgcaaattggatgggggtgacgaagtccgacttccgccg
ttacgtcttattcaggatcgggcgattgtcgcgccatcggctgcatttctggccaggatg
gaggcagcgattgtgttcgaggacgcgcgtttgttggcgttgaacaaacccagtggtatg
gctagccatggcggcagtgggatcagttacggcgtgattgaggctatgcgtatcttgcgt
cctaagcaggaactggaacttgtacatcgtttggatcgtgatacctctggtttgttgatc
atggcaaaaaagcgtgcagttctcattgagttgcaggcattgatgcgcgaagccagcgtg
aatggtaaggaggggcgtggtattgccaagcgctatttgactttgttatcagggcgtatg
cccaatggagtgatgagtgttgatgcgccgttgcatattaatttgcgccatgggggagag
cgtcatgtccgggtgcatcatgatgggaagccttcaaagagtcgtttccgtttgctagag
cggcgtggagggcaatcgtattgcgaggtgttgatcgaaactggtcgaactcatcagatt
cgtgtgcatgcacagcatctcggtcatccagttactggggacgacaagtacggtgatcag
gaggtcaaccggaagttgcgcgatcagattggtttacagcgtcttttcttacatgctgtg
tcgttggagtttgctttggatgctggaagtacgccctatgtgttgaatgctccattggcg
gaggacttggtggccgccttagaccgtctttag
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