Xylella fastidiosa Temecula1: PD_2047
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Entry
PD_2047 CDS
T00113
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PD_2047 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xft03400
]
PD_2047 (priA)
Enzymes [BR:
xft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PD_2047 (priA)
DNA repair and recombination proteins [BR:
xft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PD_2047 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
DUF7129
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AAO29871
UniProt:
Q879Z2
LinkDB
All DBs
Position
2411294..2413495
Genome browser
AA seq
733 aa
AA seq
DB search
MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKRELIGVVVELPSAEMSV
PLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILATALPGLLRHGKPLPETWTCWA
WRLTETGRTAAPKLRRNSRSAQMAELLTASDQTEDALNTRMNRWRAVAHNLTKRGYVERI
KKPTTVPVIIQTTSNTVPVLNTEQQKAVETLNANVGFKTYLLDGVTGSGKTEVYLQAIAT
CLAASKQALVLVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATARCGEARLV
LGTRSAVFTPLPNAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNVPVILGSATPS
LESLYNAHNGRYKHLRLSYRAGQAYAPQVRVLDVRKRPLKDGLSPEVLTGINATLARDEQ
VLVFKNRCGYSPVLLCHDCGWTATCHQCSTSVHHTPMTVYSGGTYLQCHHCGARQPMPLS
CPDCGSTALQPQGIGTERLEARLIEAFPKHPVVRIDRNTTKHRDGLKTQFTKLGNAAGIL
VGTQILAKGHHLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAKHAGEVWL
QTHHPDHPLLQTLINGGYHTFANTELQQRQAAWLPPFAHLALLRAEAKDTTSTQQFLTTI
RKHMPTNNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNALHRTLNVLIPAIHALPEARR
VRWSLDVDPVDLY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccccctacgatcctacgtgtggcgttgccaatccctttaccgcaatgcttcgactat
ctgccgccaagcggcataccactcccagattcaaccttaggctgccgcgtacgtgtgcca
ttcgggaaacgtgagctgatcggtgtagtcgtcgaacttccatcagccgaaatgtcagta
ccattacgcgaggcattcgcctggattgaccgtataccaattctagatggcgagctggca
caatcgttacagtggctgtcacactacacgcataccccactaggtgagatattagctacg
gctcttcccgggctgttacgtcatggtaaacccttaccagagacctggacctgctgggct
tggcgtctaaccgaaaccgggcgcactgccgctcccaagctgcgtcgcaacagccgctca
gcacaaatggctgaattactcaccgccagtgatcaaacggaagatgcacttaacactcgg
atgaatcgctggcgcgcagttgcacacaacctaaccaagcgtggttatgtcgaacgcatc
aagaaacctacaacggtacctgtaatcatccagaccacaagcaacaccgtacctgtactc
aacactgaacaacagaaagcagttgagacactaaacgctaacgtaggcttcaaaacttat
cttctagatggagtcaccggcagcggtaaaacagaagtctacctacaagccatcgctacc
tgcttagctgcgagtaaacaagcattggtcttagtccctgagatcggcttgacacctcaa
cttctaaccaacttccatgcccgcctcggaatacccgtgcatgccctgcactctaaattg
gcagacagcgaacgcgcccgcgtgtgggcgacggcacgatgtggcgaggcacgactggta
ctaggaacccgctcagcggtgttcacccccctacctaatgccggactaattatagtagat
gaggaacacgacacgagttacaagcagcaagacgggatacgttacaacgcgcgcgatttc
gcattggtgcgcggcaaggcactgaacgtaccggtcatcctcgggagtgccactccgtca
ctggaatcactgtacaacgcgcataacggacgctacaagcacctccgcctcagctaccgt
gccggtcaagcgtatgcccctcaggtgcgcgtactagacgtgcgcaaaagaccactgaaa
gacggcctatcacccgaggtattaacaggaattaacgcaactttagcgcgtgatgagcag
gtactcgtattcaagaaccggtgcggctattcaccagtgttgctatgtcacgactgcggc
tggaccgctacctgtcaccagtgcagtacatcagtgcaccacacaccaatgactgtatac
agcggcggaacctatttacagtgccaccactgcggcgcacgccagccaatgccactatca
tgcccagactgcggcagtacagcgctacagccacagggcataggcaccgaacgcctagaa
gctcgcctgattgaggctttccctaaacatcctgtggtgcgtattgatcgcaacacaacc
aagcaccgcgacggactaaaaacccaattcaccaaactcggcaatgccgctggcatttta
gtaggcacacagattctagccaaagggcatcacctaccacgcttaacgatggtcgtggtc
gttggaatcgacgaaggcctattctcagccgacttccgtgccactgaaaagctctcccag
caactgatccaagttgctggccgcgctggccgtgctaaacacgccggagaagtctggcta
caaactcaccaccctgatcaccctctgttgcaaacactaatcaacggcggctaccacacc
tttgctaatacggagctacaacaacgccaagccgcttggttaccaccattcgcacacttg
gcactcctgcgtgctgaagcgaaagacacaacctcaacacaacagtttctcaccacgata
cgcaaacacatgccaaccaacaatgcagtcgaatgctacggcccaatgtcggctcccatg
ccgcgccgcgccggctacgagcgctaccaattattgctgtccagctcccaacgtaacgca
ctacaccgcacactcaatgtcttgataccagcaattcatgcactgccagaagcacgccga
gtccgctggtcgttagacgtggatccagttgatctttactaa
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