KEGG   Xylella fastidiosa Temecula1: PD_2074
Entry
PD_2074           CDS       T00113                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
xft  Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:xft00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xft02048]
    PD_2074 (hsdR)
Enzymes [BR:xft01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PD_2074 (hsdR)
Prokaryotic defense system [BR:xft02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PD_2074 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD SNF2-rel_dom Herpes_BTRF1
Other DBs
NCBI-ProteinID: AAO29897
UniProt: Q879W6
LinkDB
Position
complement(2457629..2460652)
AA seq 1007 aa
MSEPIPPFRYAPIVCSEQSTIVAEFVPEASGVREAGYQSEAELEAAFIKQLQGQAYEYLP
ITSEAALLANLRRQLEKLNKVTLSDAEWEGFFSTCIAGAHDGIVEKTARIQENHVQVLKR
DDGTIKNMCLLDKVNIHNNTLQVMNQYAVEGARANRYDVTVLVNGLPMVHVELKRRGVDI
REAFNQINRYQRDSFWAGSGLLDYVQLFVISNGTLTKYYSNTVRAGHVEEQSNKRSKSKT
SNSFSFAIWWADAKNQPITELTSFTKTFFAKHSLLNVLTKYCVFNAKRKLLVMRPYQIVA
AERILQRIVIATHQQQLGTVAAGGYIWHTTGSGKTLTSFKVAQLACGLGVIDKVLFVVDR
KDLDYQTMREYESFQKGAANSNTSTAVLQRQLEDSDVHIIITTIQKLSRFVAKHKQHPVY
GAHVVVIFDECHRSQFGDMHTKITRAFQRYHLFGFTGTPIFAENAGSTQNPMRRTTQQTF
GDTLHTYTIVDAINDKTVLPFRIDYINTIKSQPNIKDKKVAAIDTERALLAPERIRQIVS
YIREHFDQKTKRASIYRHEGQRLAGFNSLLATASIDAAKRYYAELMAQQKELPEARRLKV
GLIYSVAANEGGGDGGLGEEEFETEGLDQESRNFLEAAIQDYNALFGTSFDTSADKFQNY
YKDVSERLKKRKLDILIVVNMFLTGFDATTLNTLWVDKPLKAHGLIQAYSRTNRILNSVK
SYGNIVSFRNLEQETNEALALFGNKDAKGIVLLRPYAEYYKQYEERVGELMAAFPLGKAI
VGEAAQKAFITLFGSILRLKNILTAFDDFGGQEILTEREFQDYQSLYLNLYAEFRSASAA
EKESINDDVVFEIELIKQVEINVDFILLLVEQYVKKKGTGEDKDIRATIERAIHSSPSLR
NKKELIEQFVDAVSMKAKVDAQWQAFVAVKQSQELEGIIAEENLNAEAAREFIGNAFRDG
GIPAMGTAITKVLPPVSRFSKNNGHAAKKQAVLDKFATFFERYFGLV
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgagtgaacctatcccaccctttcgttatgcacctattgtgtgctctgagcagagcacc
attgttgccgagtttgtacccgaggcctcgggtgtgcgtgaggcgggatatcagtccgaa
gcggagttggaagcagctttcatcaagcagttgcaggggcaggcctacgaatatctgccg
atcacctcggaggccgcgttgctggccaatcttcggcgccagttggaaaagctcaacaag
gtcacgctgtcggatgcagagtgggaaggttttttcagtacctgcatcgcgggtgcacat
gacggcattgtggaaaaaacggcacgtattcaagaaaaccatgtgcaggtcttgaagcgc
gacgatggcaccattaaaaacatgtgtctgcttgacaaggtcaacatccacaacaacacc
ttgcaggtgatgaatcagtacgcagtggagggcgctcgtgccaaccgctatgacgtcacg
gtgttggtgaacggtttgccgatggtgcatgttgagttgaagcgccgcggcgtggacatt
cgcgaggcgttcaatcagatcaaccgttatcagcgtgatagcttttgggcgggttcgggg
ttgttagattatgtgcagctttttgtcatcagcaatggcacgttgaccaagtattacagc
aatacggtgcgtgccgggcatgtggaggagcaatctaacaagcgcagtaagagtaagacg
tccaacagtttctcttttgccatttggtgggcagatgcgaaaaatcagccgatcaccgag
ttaactagttttaccaaaacgtttttcgccaagcattcgctgcttaacgtgctgaccaaa
tactgcgtgtttaatgccaagcgtaagttgttggtgatgcggccttatcagattgtggct
gccgagcgcattttgcaacgcattgtcattgccacacatcagcagcagttgggtacggtg
gcggcaggtggctatatttggcacaccacgggcagcggcaaaacgctgacgagtttcaag
gtggcgcaattggcatgcggtctgggtgtgatcgacaaggtgttgtttgtggtggatcgt
aaggacttggactaccagacgatgcgtgagtacgagtcttttcagaaaggtgcggcgaac
tccaacacgtccacggcggtattgcaacggcagttggaagattccgacgtccacatcatt
atcaccaccattcagaagctttcccgctttgtcgccaagcacaagcagcacccggtgtat
ggggcgcatgtggtggtgatttttgatgagtgtcatcgtagtcaattcggcgatatgcac
accaaaatcaccagggcgtttcagcgttatcacttgtttggtttcactggtacgcccatt
tttgctgagaatgcaggcagtacacagaacccgatgcggcgcacgacgcaacagacgttt
ggcgatacgttgcatacgtatacgattgttgatgcgatcaatgataagacggtgttgcca
tttcgcattgattacatcaatacgatcaaatcacagccgaatatcaaagataagaaggtg
gcggctattgataccgagcgggcgttgttggcaccagagcggatcaggcagattgtgagc
tatatccgtgagcactttgaccaaaaaaccaagcgtgccagcatctaccgtcacgagggt
cagcgactggcggggtttaattcgctgttggccactgcttccattgatgcggctaaacgt
tattacgcggaattgatggcgcagcaaaaggagctgcccgaggcacgacggttgaaggtg
gggttgatctacagtgttgctgccaatgaggggggaggtgacggggggctgggtgaggag
gagtttgaaactgagggtttggatcaagagtcgcggaattttctggaagctgcgatccag
gattacaacgcgttgtttggtaccagtttcgatacctcggcagacaagttccagaactac
tacaaggatgtgtcggaacgcctgaaaaaacgtaagttggacattctcatcgtggtcaat
atgttcctgaccggctttgacgcgaccacgctcaacacgctgtgggtggacaagcctctg
aaggcgcacggtttgatacaggcttattcgcgcaccaaccgcattctcaattcggttaag
agctacggcaacatcgtttctttccgcaatctggagcaggagacgaatgaggcgctggct
ttgtttggcaacaaggacgccaagggcatcgtgctgttgcggccttacgctgagtattac
aagcagtatgaggagcgggtgggggaactgatggctgcatttccgctggggaaggcgatc
gtcggggaggcggcacaaaaggcatttatcacgttattcggttcgatattgaggctgaaa
aatattctgactgcttttgatgattttggcggtcaggaaattctcacggagcgggagttt
caggattatcagagtctgtatttgaatctgtatgcggaattccgcagtgcatcggctgct
gagaaggaatcgattaatgatgatgtggtcttcgagattgaactcatcaagcaggtggaa
atcaatgttgatttcattttgttgttggtcgagcagtatgtgaagaaaaaggggacgggg
gaggataaggacatccgtgcgacgatcgagcgtgccattcattccagccccagtttgcgt
aataagaaagagttgattgagcagtttgtcgatgcggtgagcatgaaggccaaggtggat
gcgcagtggcaggcttttgtggcggtgaagcagagccaggagttggagggcatcatcgcg
gaggagaatctcaacgctgaggcggcacgtgagttcattggaaatgcgttccgcgatggc
ggcatccctgccatgggcacggcaatcaccaaagtcttgccgccggtatcgcgattttcc
aagaacaacggccatgcagccaagaagcaggcggtgctggacaagtttgctaccttcttt
gagcgatattttgggctggtttga

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