Xanthomonas citri pv. fuscans: XFF4834R_chr00370
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Entry
XFF4834R_chr00370 CDS
T03094
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfu03032
]
XFF4834R_chr00370
03400 DNA repair and recombination proteins [BR:
xfu03400
]
XFF4834R_chr00370
Enzymes [BR:
xfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XFF4834R_chr00370
DNA replication proteins [BR:
xfu03032
]
Prokaryotic type
DNA Topoisomerases
XFF4834R_chr00370
DNA repair and recombination proteins [BR:
xfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XFF4834R_chr00370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
CDF59726
LinkDB
All DBs
Position
44771..46048
Genome browser
AA seq
425 aa
AA seq
DB search
MACAHGVVAALTQPSPAAPNNRGQSFDLCAMKAKRVLRNATVAASTVGKLAAVATGAAVA
TAAVASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADAETLQRI
RSLAIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADWAQVRGEGKFERVIAFGTAL
PKLRRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEF
LKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEV
NDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALNQVQNDVIREVADALG
NTPSVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAATLKFLSASRSKLKTQAKSVA
RRKSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgcacatggcgttgtcgctgcgttgacgcagcctagtcctgctgcacctaac
aatcgcggccagtccttcgacctgtgcgcaatgaaagccaaacgtgttcttcgcaatgcc
acagtggccgccagtacggtcggcaagctcgcggcggtcgccaccggcgcggccgtcgcc
acggccgccgtggcaagcgcggcagcggtagcgcaggccaaggcgaccgcgcgtgcggcc
gggctgacctatgtcaacgatcaacagcccggcatcagccgccgcaaggccggcaagagc
ttcagttaccgcgatgccgacgggcaacgcattgccgatgccgagaccttgcagcgcatc
cgttcgctggcgattccgccggcctataccgaagtgtggatctgcgccaagcccaatggc
catctgcaggccaccgggcgcgatgcgcggcggcgcaagcaataccgctaccacgccgac
tgggcacaggtacgcggcgagggcaagttcgaacgcgtgatcgccttcggtaccgcgctg
cccaaactgcggcggcggttgcgtcgcgatctgctgctgccgggatttccacgcgaaaag
gtgctggcgatcgtggtggcgttgctggccgacaccctggtgcgcgtcggcaatgccgaa
tacgcacgcagcaatcgctcgtacggactgaccacgctgcgcaaccggcatatggaattt
ttgaaaggcggacgcgcgcggctgaagttccgcggcaagagcggccaggaccacgatatc
gaagtggacgacaagcagctggtcaaactgatccggcaatgccagcagctgccggggcaa
tcgctgttccagtaccgcgacgacgatggccagttgcagccggtggattcgggtgaggtc
aacgactatctacgcgaggcgatgggcgaagacttcaccgccaaggatttccgcacctgg
ggcggcaccttggctgcactgcagcggctggcacgcctgccattgcccgagcgcagcagc
gaacgcgcgctgaatcaggtgcagaacgatgtcatccgtgaggtggccgatgccttgggc
aacacgccctcggtgtgtcgcaaggcctacatcgacccatgcgtcttcgaaggctggcgt
gcgggccagctgcaggccatggccaccggtgtgcgtggcgagcgccagtgggaggcggcc
acgctgaagttcttgagcgcttcgcgtagcaagctcaagacacaggcgaagtctgtggca
aggcgcaagtcggcgtaa
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