Xanthomonas citri pv. fuscans: XFF4834R_chr04900
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Entry
XFF4834R_chr04900 CDS
T03094
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XFF4834R_chr04900 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfu03019
]
XFF4834R_chr04900 (rppH)
Messenger RNA biogenesis [BR:
xfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XFF4834R_chr04900 (rppH)
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Paralog
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
CDF60142
UniProt:
A0AAX2HLV1
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All DBs
Position
553159..553776
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AA seq
205 aa
AA seq
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MIDPDGFRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELREETGL
LPEHVELLGATPGWLRYRLPSRAVRRNERQVCIGQKQVWFLLQFTGDESHLKLDHTDTPE
FDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQSLAGPAAVGAMPERALEAWLPGSS
AAGHDSPRKRPRKRNGARAMRINND
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggtttccggccaaacgtcggcattgtgctgatgcggcaggacggt
caggtgttctgggcgcgacgtgtgcgcagggacggctggcagttcccgcaaggtggcatg
aacaccgatgagacgcccgttgaagccatgtaccgcgagttgcgcgaagaaacagggttg
ttgcccgagcatgtggaattgctcggcgccacgcctggatggctacgctatcggcttccc
agccgggcggtgcgccgcaatgagcggcaggtgtgtatcgggcagaagcaggtctggttc
ctgctgcagttcaccggcgacgaatcccatctcaagctcgaccataccgacaccccggag
ttcgaccactggcgctgggtggatttctggtatccggtcgagcacgtggtgatgttcaag
cgcggcgtctatgcccgcgcgctgcgtcatctggcgccgcttgcgcagagcctggccggt
ccggcggcagtcggtgcgatgcccgagcgtgcgctggaggcgtggttgccgggcagcagc
gcggcagggcacgacagcccacgcaagcggccacgcaagcgcaacggggctcgtgcgatg
cggattaataatgattaa
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