Xanthomonas citri pv. fuscans: XFF4834R_chr06430
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Entry
XFF4834R_chr06430 CDS
T03094
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00300
Lysine biosynthesis
xfu00470
D-Amino acid metabolism
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
xfu01120
Microbial metabolism in diverse environments
xfu01230
Biosynthesis of amino acids
Module
xfu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XFF4834R_chr06430 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XFF4834R_chr06430 (dapF)
Enzymes [BR:
xfu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XFF4834R_chr06430 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CDF60279
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Position
732597..733451
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AA seq
284 aa
AA seq
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MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAP
RSDGAAAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPVTAHAVERLDG
DRYAVAMGVPQFEPTQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAA
PVERVGALLQQNAAFPDSVNVGFAQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggtcgcagcgggcgtctgcgtttcaccaaaatgcatggcgccggcaac
gatttcgtggtgctggacctgcgcgacggtacgccaccaccggatgccgcactggcagcg
cagttggccgaccgtcacttcggcgttggctgcgatcagatcctgaccatcgaggcgccg
cgcagcgacggcgctgcggcagcctacggcatctggaattccgatggctcggccgcgcgc
caatgcggcaatggcgcccgttgtgtcgccgcatggctggtgcgcgacggcaccgcccag
ggcgagcgcttcatcatcgacagtccggtgaccgcgcacgcggtcgagcgcctcgacggc
gaccgttacgcggtggcgatgggcgtcccgcagttcgagcccacccagattccgctggcc
gggtttgcgcatgcacgcgacgaatatgcgctgccggtgcacggcgagaccgtgcgcttt
ggtgcggtgtcgatgggcaacccgcacgcggtggtcgaagtcggtcgcgtcgatgcagcg
ccggtggaacgcgtgggcgcgctgctgcagcagaacgccgcgtttcccgattcggtcaat
gtgggtttcgcgcaggtggtcgaccccgcgcatgtgcgcctgcgcgtgttcgagcgcggc
gttggcgaaacgctggcctgtgggagtggcgcctgtgcggctgcggtggtgttgatgcag
cgcggccgtgtcgagcgcgacgtgcaggtgtccttgcccggtggcgagttacgcattcgt
tggcccggcgaccaggagcaggtcgtgatgtccggcccggctgtgttcgtcttcgatgga
gagtggaaccgatga
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