Xanthomonas citri pv. fuscans: XFF4834R_chr06680
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Entry
XFF4834R_chr06680 CDS
T03094
Symbol
mrdA
Name
(GenBank) Probable penicillin-binding protein 2 (transpeptidase involved in peptidoglycan synthesis)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00550
Peptidoglycan biosynthesis
xfu01100
Metabolic pathways
xfu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XFF4834R_chr06680 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XFF4834R_chr06680 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfu01011
]
XFF4834R_chr06680 (mrdA)
Enzymes [BR:
xfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XFF4834R_chr06680 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
xfu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
XFF4834R_chr06680 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CDF60304
UniProt:
A0AB34Q8Z6
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All DBs
Position
763761..765821
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AA seq
686 aa
AA seq
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MHGRRHPKNPHAEAEQFRRRAVLGFVMVVICLVGLGGWYFKLQVLDHEVYATRSEANRIK
PKPVVPGRGMIYDRTGRLLAENVPAFRLDVTPDKVTDMNAMLDALGKVIPIAPEDLERFN
RERRARRSFLPVTLKLRMSDEEMARFAVERWRFPGVELEPYLTRRYPYGPLFAHIIGYVG
RIDEKDLAVLGEGNAALTHMGKSGLERYYEQDLRGQVGYEQVETNVQGRAIRTVGRVAPQ
SGADLRLSVDADLQRAMVAAFGEHEGAAIAMDPRTGEILGMVSLPSYDPNLFVNGISHTD
FKMLNDNPSRPQFNRLVLGGVAPGSTLKPLIALAGLDSGLRRPEDRVLSTGMFYLPGVSR
GWGDSHRGGHGWTDLRKSIAQSVNTYYYRLAVDMGIERFDRYLGDYGFGQPTGVDLLGEI
GGILPSPAYKYKTRKERWYPGDTVNIAIGQGDWKVTPLQLVRGISATASGLLLRPHLVLE
ERTGFDHPWQPMIQPPGKPISTNAAHLQAVREGMMDTMRPGGTGYAITPGAPYQMAGKTG
TAQVVSRKGVAAVDPRSLPMHLRHRGLFVGFAPADNPVIAVAVAVEGGGFGTSSAAPIAR
KIFDAWLLGKMPAGLEPLDSELGMTAVGVNQFEAGVTDARAAGDAAAATLDELPVVIGQT
AVALDPNTPAQPVVPDVPDAVQETDH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggcgccgtcatccgaagaatccgcatgcggaggccgaacagttccgccgccgc
gcggtgctgggctttgtgatggtggtgatctgcctggtcggcctgggcggctggtatttc
aagctgcaggtgctcgaccacgaggtctacgccacccgctcggaggccaaccgcatcaag
cccaaaccggtggtgcccgggcgcggcatgatctacgaccgcaccggccggctgctggcc
gaaaacgtgccggccttccgtctggacgtgacccccgacaaggtcaccgacatgaacgcc
atgctggacgcgttgggcaaggtgatcccgatcgcgccggaggatctggagcgcttcaac
cgcgagcgccgcgcgcgccgcagcttcctgccggtgacgctcaagctgcgcatgagcgat
gaagagatggcgcgctttgcggtggagcgctggcgtttccctggtgtggaactggagccg
tatctgacccggcgctacccgtacggcccgttgttcgcgcacatcatcggctacgtcggc
cggatcgacgaaaaagacctggcggtgctgggcgagggcaatgccgcgctcacccacatg
ggcaaatccggattggagcgctactacgaacaggatctgcgcgggcaggtcggttacgag
caggtcgaaaccaatgtgcaggggcgggccatccgcaccgtcggccgggtcgcgccgcaa
tcgggtgcggacctgcgcctgtcggtggatgccgacctgcagcgcgcgatggtggccgcg
ttcggcgagcatgaaggcgcggccattgcgatggacccgcgcaccggcgagatcctgggc
atggtcagcctgcccagctacgaccccaatctgttcgtcaacggcatctcgcataccgat
ttcaagatgctcaacgacaacccgtcgcggccgcagttcaaccggctggtgctcggtggc
gtggcgccgggctccacgctcaagccgctgattgcgctggccggtctggacagcggcctg
cgccggccggaagaccgggtgttgtccaccggcatgttctatctgccgggcgtcagccgc
ggctggggcgactcgcaccgcggcgggcatggctggaccgatctacgcaaatccatcgcc
cagtcggtcaatacctattactaccgcctggcggtggacatgggcatcgagcgcttcgac
cgctatctgggcgactacggtttcggccagcccaccggggtggatctgttgggcgaaatc
ggcggcatcctgccgtcgccggcttacaagtacaagacccgcaaggagcgctggtacccc
ggcgacaccgtcaacatcgcgatcggccagggcgactggaaggtgaccccgctgcagctg
gtgcgcggcatttcggcgactgccagtggcctgctgctgcgtccgcacctggtgctggaa
gagcgcaccggtttcgatcacccctggcagccgatgatccagccgccgggcaagccgatc
agcaccaatgccgcgcatctgcaggcagtgcgcgaaggcatgatggacaccatgcgcccc
ggcggtaccggctacgccatcacccctggcgcgccgtaccagatggccggcaagaccggt
accgcgcaggtggtcagccgcaagggcgtggcggcggtggacccgcgcagtttgccgatg
catctgcgtcaccgcggcctgttcgtcggcttcgcgccggccgacaacccggtcatcgcc
gtggcggtggcggtggagggcggcggcttcggtaccagctcggcggcgccgatcgcgcgc
aagatcttcgatgcctggttgctcggcaagatgcccgccggcctggagccgctggacagc
gagctcggcatgaccgcggtgggcgtcaatcagttcgaagccggtgtgaccgacgcgcgt
gcggccggcgatgcggccgccgccacgctggacgagctgccggtggtgatcggccagacc
gccgttgcgctggaccccaacacgcccgcgcaaccggtggtgccggatgtgccggacgcg
gtgcaggagaccgaccattga
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