Xanthomonas citri pv. fuscans: XFF4834R_chr08800
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Entry
XFF4834R_chr08800 CDS
T03094
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional dual regulator
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfu03000
]
XFF4834R_chr08800 (csiR)
Transcription factors [BR:
xfu03000
]
Prokaryotic type
Helix-turn-helix
GntR family
XFF4834R_chr08800 (csiR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
HTH_11
Rrf2
HTH_27
Motif
Other DBs
NCBI-ProteinID:
CDF60512
LinkDB
All DBs
Position
complement(1021342..1022007)
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AA seq
221 aa
AA seq
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MANNHRLQAIQQLRELILCGTFAPGERVTEAALAERLAISRTPIRQALPALCQEGLLVQA
GSRGYAVRRFSQQESLDALAVRAVMEGMAARTVAERGAPAELLATLYACLGEGDRILASR
TLCADDEQAYGAMNARFHRAIVEAANKPILTETVERCTLVPFVSPVNVVFGQRTAALAYD
DLFYGHRQHGAIVSAIEQRDGARAELLFREHANTQRHSMGI
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaccaccgattgcaagcgattcagcagctacgcgaattgatcctgtgcggc
accttcgcgcccggcgagcgcgtcaccgaggcggcactggccgagcgcctggcgatttcg
cgcacgccgatccgtcaggccctgccggcgttatgccaggaagggctgctggtgcaggcg
ggcagccgtggttacgccgtgcggcgcttcagccagcaggaaagcctggatgcactggca
gtgcgcgcagtgatggaaggcatggccgcacgcaccgtcgccgaacggggcgcccccgcc
gagctgctcgccacgttgtatgcctgcctgggcgaaggcgaccgcatcctggccagccgc
accctctgcgccgacgatgagcaggcgtatggcgcaatgaacgcccgtttccaccgcgcc
atcgtggaggcggccaacaagccgatcctgaccgaaaccgtggaacgctgcacattggtg
ccgttcgtcagcccggtcaacgtcgtgttcggccaacgcactgccgcgcttgcctacgac
gatctgttttacggacacaggcaacacggcgcgatcgtgtcggccatcgagcaacgcgat
ggcgcacgcgcggaattactgtttcgcgaacacgccaacacgcaacggcacagcatggga
atctga
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