Xanthomonas citri pv. fuscans: XFF4834R_chr10020
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Entry
XFF4834R_chr10020 CDS
T03094
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XFF4834R_chr10020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfu03021
]
XFF4834R_chr10020 (rpoA)
03400 DNA repair and recombination proteins [BR:
xfu03400
]
XFF4834R_chr10020 (rpoA)
Enzymes [BR:
xfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XFF4834R_chr10020 (rpoA)
Transcription machinery [BR:
xfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XFF4834R_chr10020 (rpoA)
DNA repair and recombination proteins [BR:
xfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XFF4834R_chr10020 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CDF60622
UniProt:
A0AAX2HNF8
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All DBs
Position
1132809..1133807
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaaccgtgccaaggtcgtgatcgaacccttggagcgcggttacgggcacacgctgggc
aatgccctgcgtcgtgtgttgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaaggtctgcaggaagacgtgctcgac
gtcctgctgaacctgaaagacgtggcgattcgtatgcacagtggcgatagcgccacgctg
tcgttgtccaagcagggtccgggtacggtcactgcggcagacatcaggaccgatcacaac
gtcgagatcatcaacggcgaccacgtgatctgccacctgaccaaggacacggcgctgaac
atgcgcctgaagatcgagcgcggtttcggctatcagccggctgctgcgcgtcgtcgtccg
gacgaagagacccgcaccatcggtcgtctgatgctggacgcgtcgttctcgcccgtgcgt
cgcgttgcctacgccgtggaagctgcgcgtgttgaacagcgcaccgacctcgacaagctg
gtgatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatccttagcgatcagctgtcggtgttcggcgatttcacccaccgcgaccgcggtgcg
gccaagccggctgccagcggtgtggatccggtgctgctgcgcccgatcgacgacctcgag
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtcgagctgctcaagaccccgaatctgggcaagaagtcgctgacc
gaaatcaaggaagtgctggcccagcgcggcctcgctctgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgcttggttaa
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