Xanthomonas citri pv. fuscans: XFF4834R_chr11300
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Entry
XFF4834R_chr11300 CDS
T03094
Symbol
prpR
Name
(GenBank) probable two component system regulatory protein, sigma 54-dependent, propionate catabolism activator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfu03000
]
XFF4834R_chr11300 (prpR)
Transcription factors [BR:
xfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
XFF4834R_chr11300 (prpR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_23
AAA
nSTAND3
HTH_30
HTH_17
HTH_Tnp_1_2
AAA_7
ATPase
Motif
Other DBs
NCBI-ProteinID:
CDF60730
LinkDB
All DBs
Position
complement(1258651..1260213)
Genome browser
AA seq
520 aa
AA seq
DB search
MPIIWTVSVSRLTGLLADVIPEFDQRARIEQINLGFAEAVEVIGQRLRRERCDALVAGGS
NAAYLRSRLALPLAPIQATGFDLMEALARARRIAPRIGVVTHATDVPSFHAFQHSFDLEI
EHRRFVTAEDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLYSADSVRHALEQAI
TLGTAPGTDRVAARTATRRIRRADALLGDDSAMLHVRELVQLYAPHAGTVLISGETGTGK
ELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYSDGAFTGARRGGHTGLIETAQDG
TLFLDEIGELPMPLQTRLLRVLEEREVLRVGATVPVAIDVRVVAASLQELQQSVEQGRFR
RDLFYRLAALRIALPPLRHRHHDIALLLAHYFQQLGSIPSPLSPAGLQRLQQHPWPGNVR
ELRNLVERLCIHWKAQPHDSLSLEQLERWAPELFDTPADNNGAPREHADLATSRLQLTAS
AVRVALDRANGNRALAAQALGVSRTTLWRWMQAQTAASRA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgcccatcatctggaccgtcagcgtttcgcgcctgaccggcctgctggccgacgtcatc
cccgagttcgaccagcgcgcgcgcatcgagcagatcaacctcggctttgccgaagcggtc
gaggtcatcggccagcgcctgcgccgcgagcgctgcgacgcgctggtggccggcggatcc
aatgcggcctacctgcgcagccggctcgcgctgcccttggcgcccatccaggccaccggg
ttcgatctgatggaagcgctggcgcgggcgcgccgcatcgcgccgcgcatcggcgtggtc
acccatgccaccgatgtgccgtcgtttcacgccttccagcacagcttcgatctggagatc
gaacaccgccgtttcgtcaccgccgaagacgcgcgcgactgcatcgccgatctgcgcgcc
agcggcatccaggtcattgtcggcaccggcatggcgatcgacttcgccgagcaggccggg
ctgcctggcgtgctgctgtattcggccgactcggtgcgtcatgcgctggaacaggccatt
acgctgggcaccgctccaggcaccgaccgcgtcgccgctcgcaccgccacgcgccgcatc
cgccgggccgacgccctgctgggcgacgacagcgcaatgctgcacgtgcgcgagttggtg
cagctgtacgcaccgcatgccggcaccgtgttgatcagcggcgaaaccggcactggcaag
gaactggtcgcacgacaactgcatgccggcagccgccgccgcggccgtttcgtggcgatc
aattgtggcgccatcagcgaatcgttgctggaggcggaactgttcggctacagcgacggc
gccttcaccggagcccgccgcggcggtcacaccggcctgatcgaaaccgcgcaggacggc
acgctattcctcgacgaaatcggcgagttaccgatgccgttgcaaacgcggctattgcgc
gtattggaagagcgcgaagtgctgcgtgtcggcgcaaccgtgcccgttgcgatcgacgtg
cgcgtggtcgccgccagcctgcaggaactgcaacagtcggtcgaacaaggccgtttccgc
cgcgacctgttctatcgccttgccgcgctgcgcattgcactaccgccgttgcgacaccgc
caccacgacatcgccctattgcttgcgcattatttccagcaactcggcagcattccatcg
ccgttgtcgccagctggattgcaacgcctccagcaacatccctggcccggcaacgtgcgc
gaactgcgcaacctggtcgaacgcctgtgcattcactggaaagctcaaccgcacgacagc
ctgagcctggagcaactcgaacgctgggcgccggaattattcgatacgcctgccgacaac
aacggcgcaccacgtgagcatgccgatttagcgacctctcgcctgcagctcactgctagt
gcagtccgcgtcgcgctcgaccgcgccaacggcaaccgcgcccttgccgcgcaagcgctc
ggcgtctcgcgcaccacgctatggcgctggatgcaggcgcagacggcggcgtcgcgtgca
tag
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