Xanthomonas citri pv. fuscans: XFF4834R_chr12000
Help
Entry
XFF4834R_chr12000 CDS
T03094
Symbol
thiC
Name
(GenBank) probable thiamine biosynthesis protein thiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00730
Thiamine metabolism
xfu01100
Metabolic pathways
xfu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
XFF4834R_chr12000 (thiC)
Enzymes [BR:
xfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
XFF4834R_chr12000 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CDF60797
UniProt:
A0AB34Q980
LinkDB
All DBs
Position
1352600..1354477
Genome browser
AA seq
625 aa
AA seq
DB search
MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVRGSRADLQVPMREIALTRTPTLFGGEENP
PLSVYDTSGPYTDPRVAIDLAAGLAPLRAQWIAERGDTVALGGLSSSFGRGREHDARLDA
VRFPARRLPRVARQGANVTQMHYARRGIITPEMEYVAIRENQRLEAVTDASLRKQHPGQA
FGASIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWDIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMSEA
QALSTGMQEKSAQFVAQGAQVYRAT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcccaccgttttgcagcaacaagcccagtcgttgtcggaggccgtcacc
cagccgattcccggttcacgcaagatcttcgtgcgaggctcgcgcgcggatctgcaagtg
ccgatgcgcgagatcgcgttgacgcgcacgcccaccttgttcggtggcgaagagaatccg
ccgctcagcgtctacgacacgtccgggccttacaccgatccgcgggtggcgatcgatctg
gccgccggtctggcaccgctgcgtgcgcagtggattgccgagcgtggcgacaccgtcgcc
ctgggcgggctgagctccagcttcgggcgtggccgcgagcacgatgcgcgtctggatgca
gtgcgctttccggcgcggcgtctgccgcgggtagcgcgccagggcgccaacgtcacccag
atgcattacgcgcgccgcggcatcatcacgccggaaatggagtacgtggcgattcgcgaa
aatcagcgcctggaagcggtgaccgatgcaagcttgcgcaagcagcatccgggccaggcg
ttcggcgcctcgatccagcaacgcattacaccggagttcgtgcgcgaagagatcgcacgc
ggccgtgcgatcttgcccaacaacatcaatcaccccgaaagcgagccgatgatcatcggc
cgcaatttcctgaccaagatcaatgccaacatcggcaacagcgcggtgtcttcaggcatt
gccgaagaagtcgagaagctggtgtggtcgatccgctggggcggggacacggtcatggat
ctgtccaccggcaagcacatccatgagacgcgcgagtggatcatccgcaactcgccggtg
ccgatcggcacggtgccgatctatcaggcattggaaaaggtcgatgggcgcgccgaagaa
ctcacctgggacattttccgcgacaccttgatcgaacaggccgaacagggcgtggattac
ttcaccatccacgctggcgtgctgctgcgctacgtgcccctgaccgcaaagcgcgtgacc
ggcatcgtgtcgcgtggcggttcgatcatggccaagtggtgcctggcgcatcacaaagag
aactttctctacacgcacttcgaagacatctgccagatcatgaaggcctacgacgtggcg
ttttcgttgggcgatggcctacgccccggctgcattgccgatgccaacgacgcggcgcaa
ttcggcgagctggaaacgctgggcgagctgaccaagctcgcctggaagcacgatgtgcag
accatgatcgaaggtcccggccatgtgccgatgcaattgatcaaggaaaacatggacaag
cagctgcgcgaatgcggcgaggcgccgttctacaccctgggcccgctgaccaccgacatc
gcgccgggctacgatcacatcaccagcgcgatcggggcggcaatgatcggctggttcggc
accgccatgctctgctacgtcactccgaaagaacacctgggcctgcccaaccggcaggac
gtgcgcgacggcatcatggcctacaagatcgccgcgcatgcagccgacctcgccaagggg
catccgggcgcgcaggtgcgcgacaacgccttgagcaaggcgcgtttcgagtttcgttgg
gacgaccagttccatcttggcctggatcctgaaaaggccaaggagttccacgatgagacc
ctgcccaaggacgcgcacaaactggcacacttctgctcgatgtgcgggccgcacttctgt
tcgatgaagattacccaggacgtgcgtgattacgcggccgagcacggcatgagcgaggcg
caagcgctatcgacgggcatgcaggaaaagtccgcgcaatttgtcgcgcagggtgcacag
gtctatcgcgccacctga
DBGET
integrated database retrieval system
