Xanthomonas citri pv. fuscans: XFF4834R_chr14500
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Entry
XFF4834R_chr14500 CDS
T03094
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00300
Lysine biosynthesis
xfu00470
D-Amino acid metabolism
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
xfu01120
Microbial metabolism in diverse environments
xfu01230
Biosynthesis of amino acids
Module
xfu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XFF4834R_chr14500
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XFF4834R_chr14500
Enzymes [BR:
xfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XFF4834R_chr14500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
CDF61030
UniProt:
A0AB34QBG6
LinkDB
All DBs
Position
complement(1659378..1660574)
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AA seq
398 aa
AA seq
DB search
MSLRIDTAAVLAALPQLRERSNGPICAYVYDLAALDRHAAWMRAQLPAPCELFYAAKANA
EPPILRTLAPHVDGFEAASGGELAWLHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHV
ESLSELERLAEVAAHAVRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPCDLHAAMQR
LQASPSLRLAGFHFHLMSHQRDATAQLHLVAAYLRTVQQWRQTYALGPLRVNAGGGFGVD
YLAPDASFDWAGFCAGLPALLREHGTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWF
AIARGGTHHFRTPAAQAHDHPFRVLRGTRTPVISDTPVTLVGQLCTPKDVLARQQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQKVFLTEGH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgcatcgacaccgctgcggtgcttgcggctttgccgcagctgcgtgaacgc
agcaatgggccgatctgcgcgtatgtctacgatctggccgcattggacaggcatgcggcc
tggatgcgtgcacagttgccggcgccgtgcgaactgttctatgcggccaaggccaatgca
gagccaccgatcctgcgcacgctggcaccccatgtagatggcttcgaggccgcctccggt
ggcgagctggcctggctgcatgcgcagcaaccacaggcgcccttgctgtttggcggcccg
ggaaaactcgacaccgaactcgcccaggcagccgccctgcccgactgcaccgtgcatgtg
gaaagcctgagcgaactcgaacggctggcggaggtcgctgcgcacgccgtccgctgcgtg
ccggtgtttctgcgcatgaatatcgccgtacccggcgcgcagagcacacgcctgatgatg
ggcgggcaaccctcgccgttcggtctggatccgtgcgatctgcacgcagcgatgcagcga
ctacaggcgagcccatcgctgcgcctggcaggctttcatttccatctgatgtcgcatcaa
cgcgacgccaccgcgcagctgcatctggtcgccgcctacctgcgcaccgtgcagcaatgg
cggcagacctatgcgcttggcccactgcgggtgaacgccggtggcggcttcggtgtggat
tatctggcaccggacgcatcgttcgactgggccggcttctgcgccgggctgcccgccctg
ctgcgcgaacacggtacggacctacgcctgcgcctggaaccgggccgctatgtcagcgcc
agctgcggctggtacctgatggaggtgctcgatctcaaacgcagccacggcgcctggttt
gcgatcgcccgcggtggcacgcatcactttcgtacgccggccgcgcaggcccacgaccac
cccttccgcgtgctgcgcggcacccgcacccccgtgatcagcgacacgccggtcaccctg
gtcggccagctgtgcacgcccaaggacgtgctggcacgccagcaaccggtggccgcactc
gcacccggcgattgcctggccttcccgctagcgggcgcgtatgcgtggaatatttcgcat
cagcagttcctgatgcacccgccgccgcagaaggtgtttctaacggaggggcattga
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