Xanthomonas citri pv. fuscans: XFF4834R_chr18530
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Entry
XFF4834R_chr18530 CDS
T03094
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03030
DNA replication
xfu03430
Mismatch repair
xfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XFF4834R_chr18530 (holA)
03430 Mismatch repair
XFF4834R_chr18530 (holA)
03440 Homologous recombination
XFF4834R_chr18530 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfu03032
]
XFF4834R_chr18530 (holA)
03400 DNA repair and recombination proteins [BR:
xfu03400
]
XFF4834R_chr18530 (holA)
Enzymes [BR:
xfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XFF4834R_chr18530 (holA)
DNA replication proteins [BR:
xfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XFF4834R_chr18530 (holA)
DNA repair and recombination proteins [BR:
xfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XFF4834R_chr18530 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CDF61417
UniProt:
A0AB34QDA0
LinkDB
All DBs
Position
2118319..2119347
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSSQPLQPVYLIAGPETLRVLEAADAVRARARAEGIGEREVFDADGREFD
WNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVISRFCANPPPDVVLLITANDWSKA
HHGKWAEAVGRIGTIAVAWAIKPHELSDWIERRLRAHGLRADAAAVQRLSERVEGNLLAA
AQEIDKLALLADGKTLDLEAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRGEGE
AVAALMPILIKELLRTAALAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPHRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgcccagagcagctggccggccagtccagccagccattgcagccggtgtat
ctgatcgccggccccgagaccttgcgcgtgcttgaggccgccgatgcggtgcgcgcgcgc
gcgcgcgccgaaggcatcggcgaacgcgaagtgttcgatgccgacggccgcgagttcgac
tggaatcagcttgacgccagcttcaatgcgcccagcctgttcagtccgcgccgcctggtc
gaagtgcgtctgcccagtggcaagcccggcaaggacggggccgaggtcatcagccgcttc
tgcgccaacccgccgccggacgtggtgctgctgatcaccgccaacgactggagcaaggcg
catcacggcaagtgggcggaggcggtcggtcgcatcggcaccatcgcggtggcctgggcg
atcaagccgcacgaactgtccgactggatcgagcgccgcctgcgcgcgcacggcctgcgc
gccgacgccgctgccgtgcagcgcctgagcgagcgggtggaaggcaacctgctcgccgcc
gcgcaggaaatcgacaagctcgccctgttggccgacggcaagacgctggatctggaggcg
atggaatcgctggtggccgatgccgcgcgctatgacgtgttccggctggccgaaaccacg
ttttccgggcaaccggccgcagtgatccgcatgcttgccggcctgcgcggcgaaggcgag
gcggtcgccgcgctgatgccgatcctgatcaaggaactgctgcgcaccgcggcattggcg
aaggtgcaggccaacggcggcaacctggccgccgaaatgaaggcgcaggggctgtgggaa
tcgcgccaggcgcccttcaagcgcgcgctgcagcgtcaccccgaaccgcaccgctgggaa
cgcttcgtcgccgaagccgggctggtcgatcgcatggccaaaggtcgcgccgacggcgac
gcctgggttggtctggaacgcctgctggtggccgtggccgaagcccgcgcggtgagattg
ttggcgtga
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