Xanthomonas citri pv. fuscans: XFF4834R_chr19130
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Entry
XFF4834R_chr19130 CDS
T03094
Symbol
pcnB
Name
(GenBank) probable poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XFF4834R_chr19130 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfu03019
]
XFF4834R_chr19130 (pcnB)
Enzymes [BR:
xfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
XFF4834R_chr19130 (pcnB)
Messenger RNA biogenesis [BR:
xfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XFF4834R_chr19130 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CDF61473
UniProt:
A0AAX2HS42
LinkDB
All DBs
Position
2188492..2189859
Genome browser
AA seq
455 aa
AA seq
DB search
MGNPATQDGSAIIEPSVTSPFTLRVIPRDQHTISRKDISPNALRVLYRLRESGFGAYLVG
GAVRDLLVGGHPKDFDVATDATPEEVKALFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
VDDGSGDRELDNGRLVRDNVYGTIEDDAIRRDFTCNALYYAIEDFSVRDYCGGFEDVQAR
LMKLIGDPQLRYQEDPVRMLRAVRLAAKLNFDIEAGTAEPIPRLAGLLSEAAPARLFEEI
LKLFLSGHGVASFEGLERYGLLSALFPESAAALKSNRSGALRAMVLEGLRNTDARVANDE
PVSPAFLFALLLWPAFCRTLMGLQAQGVQPEDAQRRAADRVTLHQLERVALPRRFSLPMQ
EIWLLQTRFSSRQRKRVFRTLSHPRFRAAFDFLVLRQFASADHAADVEFWREAQKSSGQE
LVDAIESAQADHDSDEGAPRKRRRRRRRTGAPAGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaatcctgcaacacaagacggaagcgccatcatcgaaccctcagttacatctccg
ttcacgctgcgcgtcattccacgcgaccagcacaccatctcgcgcaaggacatcagcccc
aacgcgttacgcgtgttgtaccgcctgcgcgaatcgggctttggtgcctatctggtcggc
ggtgcggtccgcgacctgctggttggcggccacccgaaggatttcgacgtggccaccgac
gcgacgccggaagaggtcaaggcgctgttccgcaactgtcgcctgatcggccgccgtttc
cgtctggcacatgtggtgttcggtcgcgaaatcatcgaagtggccaccttccgcgccaat
gtcgacgatggcagcggcgaccgcgaactcgataacggccggctggtgcgcgacaacgtc
tacggcaccatcgaggacgatgcgatccgccgcgacttcacctgcaatgccttgtattac
gccatcgaggatttctcggtgcgcgattactgcggcggcttcgaagacgtgcaggcgcgc
ctgatgaagttgatcggcgacccgcagttgcgttaccaggaagacccggtgcgcatgctg
cgcgcggtgcgtctggcggccaagttgaatttcgacatcgaagccggcaccgccgaaccc
attccgcgtctggccgggctgctgtccgaagctgcgcctgcgcggttgttcgaagaaatt
ctcaagctgttcctgtctgggcacggtgtggccagcttcgaaggtctggagcgttacggc
ctgctcagcgcgttgtttccggaaagcgcggcggcattgaagtccaaccgcagtggcgcg
ttgcgcgcgatggtgttggaaggcctgcgcaataccgatgcacgcgtggccaacgacgag
ccggtgtcgccggccttcctgtttgcattgctgctgtggccggcgttctgccgcaccttg
atggggctgcaggcgcaaggcgtgcaaccggaggatgcgcagcgccgcgcggccgatcgc
gtcaccttgcatcagttggagcgcgtcgcgttgccgcgccgtttctcgctgccgatgcag
gaaatctggttactgcagacgcgtttctcctcgcgtcagcgcaagcgggtatttcgcacc
ttgtcgcatccgcgcttccgcgcggcattcgatttcctggtgctgcgtcagttcgcatcg
gccgaccacgccgccgatgtggagttctggcgcgaggcgcagaagtcctccggccaggag
ctggtggatgcgatcgaatcggcgcaggccgaccacgacagcgatgagggcgccccgcgc
aagcgtcgccgacgccgccgtcggaccggcgcaccggccggcgagtag
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