Xanthomonas citri pv. fuscans: XFF4834R_chr19960
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Entry
XFF4834R_chr19960 CDS
T03094
Name
(GenBank) probable hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00280
Valine, leucine and isoleucine degradation
xfu00650
Butanoate metabolism
xfu00907
Pinene, camphor and geraniol degradation
xfu01100
Metabolic pathways
xfu01120
Microbial metabolism in diverse environments
xfu04146
Peroxisome
Module
xfu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XFF4834R_chr19960
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XFF4834R_chr19960
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XFF4834R_chr19960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XFF4834R_chr19960
Enzymes [BR:
xfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
XFF4834R_chr19960
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GFIT
Motif
Pfam:
HMGL-like
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
CDF61544
UniProt:
A0AAX2HRG2
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All DBs
Position
complement(2289968..2290864)
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AA seq
298 aa
AA seq
DB search
MSDFVRIVEVGPRDGLQNEAQPIATADKIALIDQLSATGLRTIEATSFVSPRWVPQLADA
AEVFAGIARAPGIAYPVLVPNLQGYERARAAGAQEVAVFTAASEAFNRTNTNAGIDESIE
RFRPILQQAALDGVRVRGYVSTVLGCPYQGEVPVTDVVDVAQRLHALGCYEISLGDTIGV
GTPVKARRMLAAVAQAVPMPALAVHFHDTYGQALANIAACLEQGVRVIDAAVSGAGGCPY
ARGASGNVASEDVVYLLQGLGMPTGIDLPALARTGRWLAQLLGRDTGSKVGKALAAAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttcgtccgcatcgtcgaagttggcccacgcgatggcctgcaaaacgaagcg
cagccgatcgccactgccgacaagatcgcgttgatcgatcaactctcggccaccgggctg
cgcacgatcgaagcaaccagcttcgtcagcccacgctgggtaccgcagctggccgacgcc
gccgaggtgtttgccggcatcgcgcgggcgccgggcatcgcatatccggtgctggtgccc
aacctgcagggctacgaacgcgcacgcgccgccggggcgcaggaagtggcggtattcacc
gcagcatcggaggcgttcaatcgcaccaataccaacgcaggcatcgacgaatcgatcgaa
cggtttcggccgatcctgcagcaggccgcgctcgatggcgtacgcgtgcgcggctacgtc
tccaccgtgctgggctgcccgtaccagggcgaggtgccggtgaccgacgtggtggatgtg
gcacaacgtctgcacgcgctcggctgctatgaaatctcgctgggcgacaccattggcgtg
ggcacgccggtcaaggcgcgtcggatgttggccgcggtggcgcaggccgtgccgatgccg
gcattggcggtgcatttccacgacacctatgggcaggcgctggccaatatcgcggcctgc
ctggagcaaggcgtacgcgtgatcgatgcggccgtgtccggtgcgggcggctgcccgtat
gccaggggcgccagcggcaacgtggccagcgaagacgtggtgtacctgttgcaggggctg
ggcatgcccaccggcatcgacctgcccgccctggcccgtaccggccgctggctggcgcag
ctgctcggtcgcgacaccggcagcaaggtcggcaaggcgttggctgccgccggctga
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