Xanthomonas citri pv. fuscans: XFF4834R_chr20200
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Entry
XFF4834R_chr20200 CDS
T03094
Symbol
rpfB
Name
(GenBank) secreted acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00061
Fatty acid biosynthesis
xfu00071
Fatty acid degradation
xfu01100
Metabolic pathways
xfu01212
Fatty acid metabolism
xfu02024
Quorum sensing
xfu04146
Peroxisome
Module
xfu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XFF4834R_chr20200 (rpfB)
00071 Fatty acid degradation
XFF4834R_chr20200 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XFF4834R_chr20200 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XFF4834R_chr20200 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xfu01004
]
XFF4834R_chr20200 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xfu04147
]
XFF4834R_chr20200 (rpfB)
Enzymes [BR:
xfu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XFF4834R_chr20200 (rpfB)
Lipid biosynthesis proteins [BR:
xfu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XFF4834R_chr20200 (rpfB)
Exosome [BR:
xfu04147
]
Exosomal proteins
Exosomal proteins of breast milk
XFF4834R_chr20200 (rpfB)
Exosomal proteins of breast cancer cells
XFF4834R_chr20200 (rpfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CDF61568
UniProt:
A0AB34QBZ8
LinkDB
All DBs
Position
complement(2317573..2319255)
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AA seq
560 aa
AA seq
DB search
MNQARPWLQSYPAGVAAEIDLEQFRTVAEVFATSVKRFADRPAYHSFGKTITYREADQLV
EQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLI
DSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALLNFVVKYVKKLVPDY
RINGAIRFREALALGRKHHVPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
HQWLAGTGKLEEGNEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELK
KTRFTAFTGVNTLFNGLLNTPGFDQVDFSSLKMTLGGGMAVQRSVAERWKKVTGLTLVEA
YGLTETSPAACINPMDLKDYNGSIGLPIPSTDACIKDDAGAELPLGEIGELCIRGPQVMK
GYWKKPEETAKVMDTEGWLHTGDIARMDAQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA
EMPGVLEVAAVGVPDDKSGEIVKAVIVKKDPALTADAVKAHCRANLTGYKQPRVIEFRKE
LPKTNVGKILRRELRDAPKA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggcacgtccttggttgcaaagttatccggccggcgttgccgccgaaatcgat
cttgagcagttccgcacggtggccgaggtgtttgccacctccgtgaaacgcttcgccgac
cggcctgcgtaccacagcttcggcaagaccatcacctaccgcgaggcggatcagctggtc
gagcaattcgccgcttacctgcttggcgagttgcagttgaagaaaggcgaccgcgtcgcc
ctgatgatgcccaactgcctgcaataccccattgcgaccttcggcgtgctgcgtgccggc
ctgaccgtggtcaacgtcaatccgctgtacaccccgcgcgaactcaagcatcagttgatc
gactccggcgccagcgtgctggtggtcatcgacaacttcggcaccaccgtgcagcaggtc
atcgccgacacgccggtcaagcaagtcatcaccaccggcctgggcgacatgctgggcttc
ccgaaggcggcgctgctcaacttcgtggtcaagtacgtcaagaagctggtgcccgattac
cgcatcaacggcgcgattcgcttccgcgaggcgctggcgctgggccgcaagcaccacgtg
ccgacgctgcagatcgaacccgacgacatcgccttcctgcagtacaccggcggcaccacc
ggcgtggccaagggcgccatgctgacccaccgcaatctggtcgccaacatgcagcaggcg
caccagtggctggcaggcaccggcaagctggaagaaggcaacgaagtggtgatcaccgcg
ctgccgctgtaccacatcttcgcattgaccgcgaacggcctggtcttcatgaagatcggc
ggctgcaatcacctgatcagcaacccgcgcgacatgccgggcttcgtcaaggagctgaaa
aagacccgcttcaccgccttcaccggcgtcaacacgctgttcaacgggctgctcaatacg
cccggattcgatcaggtggatttctcctcgctcaagatgacccttggcggcggcatggcc
gtccagcgctcggtcgccgagcgctggaagaaggtcaccggcctgaccttggtcgaagcc
tacggcctgaccgaaacctcgccggccgcatgcatcaacccgatggacctgaaggactac
aacggttcgatcggcctgccgattccgtccaccgatgcctgcatcaaggacgacgccggc
gcggaactgccactgggcgagatcggcgagctgtgcatcaggggcccgcaggtcatgaag
ggctactggaagaaacccgaggaaaccgccaaggtcatggacaccgaaggctggctgcat
accggcgacatcgcgcgcatggacgcacagggcttcgtctacatcgtcgatcgcaagaag
gacatgattctggtgtccggcttcaacgtgtaccccaacgagatcgaggacgtgatcgcc
gaaatgcccggcgtgctggaagtggcagccgtcggcgtgccggatgacaagtccggtgag
atcgtcaaggcggtcatcgtgaagaaggaccctgccctgacggccgacgctgtgaaggcg
cactgccgtgccaacctcaccggctacaagcagccgcgcgtgatcgaattccgcaaggaa
ttgcccaagaccaatgtcggcaagatcctgcgccgcgagctacgagacgcgccgaaggcg
taa
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