Xanthomonas citri pv. fuscans: XFF4834R_chr20230
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Entry
XFF4834R_chr20230 CDS
T03094
Symbol
rpfA
Name
(GenBank) Probable aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00020
Citrate cycle (TCA cycle)
xfu00630
Glyoxylate and dicarboxylate metabolism
xfu00640
Propanoate metabolism
xfu00720
Other carbon fixation pathways
xfu01100
Metabolic pathways
xfu01120
Microbial metabolism in diverse environments
xfu01200
Carbon metabolism
xfu01210
2-Oxocarboxylic acid metabolism
xfu01230
Biosynthesis of amino acids
Module
xfu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xfu_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
xfu_M00012
Glyoxylate cycle
xfu_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XFF4834R_chr20230 (rpfA)
00630 Glyoxylate and dicarboxylate metabolism
XFF4834R_chr20230 (rpfA)
00640 Propanoate metabolism
XFF4834R_chr20230 (rpfA)
09102 Energy metabolism
00720 Other carbon fixation pathways
XFF4834R_chr20230 (rpfA)
Enzymes [BR:
xfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
XFF4834R_chr20230 (rpfA)
4.2.1.99 2-methylisocitrate dehydratase
XFF4834R_chr20230 (rpfA)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
CDF61571
UniProt:
A0AB34QDR1
LinkDB
All DBs
Position
complement(2320192..2322960)
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AA seq
922 aa
AA seq
DB search
MSDSFSTRTSLEVHGKRYAYYSLPKLGERFDIGHLPYSMKILLENLLRHEDGGVTVGKDH
IEAVAKWDPTAEPDTEIAFMPARVVLQDFTGVPCVVDLAAMRDAVVKLGGNADQINPQIP
SELVIDHSVQVDVFGKPDALDLNGKIEFQRNQERYGFLRWGQKAFENFKVVPPNTGIVHQ
VNLENLARVVMSADKEGTLVAYPDTVFGTDSHTTMINGIGVLGWGVGGIEAEAAMLGQPS
SMLIPQVVGFKLTGKLPEGATATDLVLTVTQMLRKAGVVGKFVEFYGDGLQHLPLADRAT
IGNMAPEYGATCGIFPVDEESLTYLRLSGRSEEQIALVEAYAKAQGLWHDANTPPARYSA
TLELDMGQVKPSLAGPKRPQDRVLLEDMQSNYRESLKPFAEARSKKLADLKQEDRLKNEG
GGGTAVGAKASQAESASASGAGWQLRDGSVVIAAITSCTNTSNPAVMLGAGLLARNAAAR
GLKAQPWVKTSLGPGSRVVTDYLEKAGVLADLEKLGFYVVGYGCTTCIGNSGPLPEDVSA
AIAKDDLVVTSVLSGNRNFEGRVHPEVKMNYLASPPLVVAYAIAGTTDIDLTTEPLGTGS
DGQPVYLRDIWPSNKEIGDTIAATVGPEMFKQNYADVFKGDTRWNTIASPDGALYEWDAA
STYIKNPPYFDGMTMQVGNVDDVHGARIMGLLGDSITTDHISPAGNIKKDSPAGRFLQER
GVQPADFNSYGSRRGNDDVMVRGTFANIRIKNLMFGGEEGGNTLYYPANGGQPEKLAIYD
AAMKYKADGVPLVVLAGKEYGTGSSRDWAAKGTNLLGVRAVIAESFERIHRSNLVGMGVL
PLQFLENENAQTLGLDGSEVLDITGLQDGASRRATVDAKKPDGSVKQFQVKVLLLTPKEV
EYFRHGGLLQYVLRQLAARKAA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccttttccactcgcacctcacttgaggtccacggcaagcgctacgcgtac
tacagcctgccgaagctgggcgaacgcttcgatatcggccatctgccctactcgatgaag
atcctgctggagaacctgctacgccatgaagacggcggcgtgaccgtcggcaaggaccat
atcgaagcggttgcaaagtgggaccccaccgccgagcccgataccgaaatcgccttcatg
ccggcgcgcgtggtgctgcaggatttcaccggcgtgccctgcgtggtcgacctggctgcg
atgcgcgatgcggtggtcaagctcggcggcaatgccgaccagatcaacccgcagattccc
tccgaactggtcatcgaccactcggtacaggtggatgtattcggcaagccggacgcgctc
gacctcaacggcaagatcgaattccagcgcaaccaggaacgctacggcttcctgcgctgg
ggccagaaggcattcgagaatttcaaggtcgtgccgcccaataccggcatcgttcaccag
gtgaacctggaaaacctggcgcgggtggtgatgagcgccgacaaggaaggcaccctggtc
gcctaccccgacaccgtgttcggcaccgacagccataccaccatgatcaacggcatcggc
gtgctgggctggggcgtgggcggcatcgaggcggaagcggccatgctggggcagccgtcg
tcgatgctgatcccgcaggtcgtgggtttcaagctcaccggcaagttgcccgagggtgcg
actgccaccgacctggtgctgacggtcacccagatgctgcgcaaggccggtgtggtgggc
aagttcgtcgagttctatggcgacggcctgcagcacctgcccttggccgaccgcgccacc
atcggcaacatggcgcccgaatacggcgccacctgtggcatcttcccggtcgacgaagaa
tcgctgacctatttgcgcctgtccggccgcagcgaggaacagattgccctggtcgaagcc
tatgccaaggcgcagggcctttggcacgacgccaataccccgcccgcccggtacagcgcc
acgctggaactggacatgggtcaggtcaagccgtcgctagccggccccaagcgcccgcag
gatcgcgtgctgctggaagatatgcagtccaactaccgcgaaagcctcaagccgtttgcc
gaagcgcgcagcaagaagctggccgatctcaagcaggaagatcgcctcaagaacgaaggt
ggcggcggcaccgccgttggtgcgaaggcatcgcaggcagaaagcgccagcgccagcggt
gccggttggcagctgcgcgatggctcggtggtcatcgccgcgatcacctcctgcaccaac
acttccaatccggcagtgatgctgggcgccggcctgctcgcgcgcaacgccgcagccagg
ggattgaaggcgcagccgtgggtcaagacctcgctcgggccgggttcgcgcgtggtcacc
gactatcttgaaaaagccggcgtgctcgccgacctggagaagcttggtttctacgtggtc
ggctacggctgcaccacctgcatcggcaactccgggccgctgccggaagacgtgtctgcg
gccattgccaaggacgatctggtggtgacatcggtgctgtcgggcaaccgcaacttcgaa
ggccgcgtgcaccccgaggtcaagatgaattacctggcctcgccgccgctggtggtggcc
tacgccatcgccggcactaccgacatcgatctcaccaccgagccgctgggcaccggcagc
gacgggcagccggtctatctgcgcgacatctggcccagcaacaaggaaatcggcgacacc
atcgccgccaccgtcggcccggagatgttcaagcagaactacgcggatgtgttcaagggc
gacacgcgctggaacaccatcgcctcgcccgatggcgcgctgtacgagtgggacgcagcc
tcgacctacatcaagaacccgccctacttcgacggcatgaccatgcaggtgggcaacgtg
gacgacgtacacggcgcgcgcatcatgggcctgttgggcgactcgatcaccaccgatcac
atctccccggccggcaacatcaagaaagattcgccggcaggccgcttcctgcaggaacgc
ggcgtgcagccggccgacttcaacagctacggcagccgccgcggcaacgatgacgtgatg
gtgcgcggcaccttcgccaacatccgcatcaagaacctgatgttcggcggcgaagaaggc
ggcaatacgctgtattacccagccaacggcggtcagccggaaaagctggccatctacgac
gctgcaatgaagtacaaggccgatggcgtgccgctggtggtgttggcgggtaaggaatac
ggcaccggctcctcacgcgactgggcggccaagggcaccaacctgctcggggtcagggcc
gtgatcgccgaaagcttcgagcgcatccaccgctccaatctggtgggcatgggtgtgctg
ccgctgcagttcctggaaaacgaaaacgcacagacgctcggcctggatggttcggaagtg
ctggacatcaccggtctgcaggacggcgccagccgccgtgccaccgtcgatgcgaaaaag
cccgatggcagcgtcaagcagttccaggtcaaggtgctgctgctgacgccgaaggaagtg
gagtacttcaggcacggcggcctgctgcagtatgtgctgcgtcagctggcggcacgcaag
gccgcctga
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