Xanthomonas citri pv. fuscans: XFF4834R_chr21450
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Entry
XFF4834R_chr21450 CDS
T03094
Symbol
orn
Name
(GenBank) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XFF4834R_chr21450 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfu03019
]
XFF4834R_chr21450 (orn)
03009 Ribosome biogenesis [BR:
xfu03009
]
XFF4834R_chr21450 (orn)
Messenger RNA biogenesis [BR:
xfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XFF4834R_chr21450 (orn)
Ribosome biogenesis [BR:
xfu03009
]
Eukaryotic type
Pre-60S particles
RNases
XFF4834R_chr21450 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2252
Motif
Other DBs
NCBI-ProteinID:
CDF61685
UniProt:
A0AB34Q582
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All DBs
Position
2487146..2487730
Genome browser
AA seq
194 aa
AA seq
DB search
MAENLAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLETLEA
MDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPTVANGFAKSSAHTALSDVRDSIDELRHYRQF
MGALGGDTQADVPA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaccttgcaggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattccatcatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgcttgccgaggggccggaactggccattgcgcatccgctggaaaccctggaagcg
atggacgaatggaaccgcaatcagcatcgccgctcgggtctgtggcagcgcgtgctcgac
agtcaggtgacccacgcgcaggccgaagcgcagacggtggcattcctgagcgagtggatc
cgcgccggcgcctcgccgatgtgcggcaactcgatctgccaggatcgccgcttcctgcac
cggcagatgtcgcgcctggagcgctatttccattaccgcaacctggacgtgtcgaccatc
aaggagctagcgcgacgttgggcgccgacggtggccaacgggtttgccaagagttctgcg
cataccgccctgagcgatgtgcgcgattcgatcgacgagttgcgccactatcgtcagttc
atgggggcgcttggtggcgatacccaggccgacgtgccggcctga
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