Xanthomonas citri pv. fuscans: XFF4834R_chr23790
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Entry
XFF4834R_chr23790 CDS
T03094
Name
(GenBank) probable polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00040
Pentose and glucuronate interconversions
xfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XFF4834R_chr23790
Enzymes [BR:
xfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XFF4834R_chr23790
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GFIT
Motif
Pfam:
Glyco_hydro_28
DUF7304
Motif
Other DBs
NCBI-ProteinID:
CDF61900
UniProt:
A0AB34Q671
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Position
2746758..2748428
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AA seq
556 aa
AA seq
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MPYHRLVPTVAPLTLALLGLATFHASAARPHGQDAPDTAHSISSSWGVVQQPTLPTQVCA
TLKAALIPVGGSLDTLDQNPAQSKRDTARLQAAIDDCPAGSAVHLVPGDAGESGLLTGPL
TIKSGVTLWIDRGVTLFGSRNPLDYDNGLGTCGTATSDKTKSCKPLIHVADTAKSAIVGA
GKIDGRGGSTLTAGPNAGTASWWDLAYLNVTKGLSQHVPRLLQIDDSTDFTLYDITLENS
ANFHVTSDNVVGLTAWGIKILAPSLVYSRPGYHCPAGSTPDVNPHATCFTPKTAKNTDGF
DPGQSKNVLLTYSYIATGDDGVAIKAHASSKRSIASENMLFAYNQFYYTHGFSLGSETDS
GIRHIAVRGLSIDGFNSNDVYTDPYSSNGLRIKSDGTRGGQVYDISFANICMRGVARPLV
FDANYANAEVRSKLPSFSGITLTNVHALGSKAFGGGELSFYGYRDAKTTLPISISLDNVV
LEGGKVAFAKPHFGGPASNPGATHFTFKGGPVSFFDQLTESASSDVQLQGKPGPGVPLQC
NDAFIAYHSVLPDSPI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccgtaccatcgccttgttcccaccgtcgcgccactgacccttgccctgctcggcctg
gccacgtttcacgccagcgcggcgcgaccgcacgggcaggatgcacccgataccgctcat
agcatttccagcagctggggggtggtccagcagcccacattaccgacccaggtatgcgcc
acgctcaaggccgcgctgattccggtgggcggctcgctcgatacgcttgaccaaaatccg
gcacagtccaaacgcgacaccgcgcgcttgcaggcggccatcgacgattgccctgccggc
agcgcagtgcaccttgtgcccggcgatgccggcgaatccgggttgctgaccgggccgctg
accattaaaagcggtgtcacgctatggatcgaccgcggcgtcaccttgttcggctcgcgc
aatccgctggattacgacaacggcctgggcacctgcggcactgcgaccagcgacaagacg
aagtcatgcaagccactcatccacgtcgccgataccgcaaaaagcgcgatcgttggtgcg
ggcaagattgatggacgcggcggcagcacgctgactgccgggccaaacgccggcaccgcc
agttggtgggatctggcctatctcaacgtcactaaaggcctgagtcaacacgtcccgcgg
ctgctgcagatcgacgacagcactgacttcacgttgtacgacatcactctggaaaattcg
gcgaatttccatgtgaccagcgataacgtggttggcctgacggcgtggggcatcaaaatt
cttgcgcccagcctggtctactcgcggccaggctaccactgcccggccggcagcacgcct
gatgtcaatccgcacgccacctgcttcaccccgaaaaccgccaagaataccgatggtttt
gatccgggccagtcgaagaatgtactgctgacgtattcgtacatcgctaccggcgatgac
ggtgttgcgatcaaggcacatgccagtagcaagcgcagcatcgcatcggaaaacatgctg
ttcgcctacaaccagttctattacacacatggtttttcgttgggcagcgaaaccgactcg
ggcatacgccatatcgccgtgcgcgggctgagcatcgatggcttcaatagcaacgatgta
tacaccgacccgtattcttccaacgggctgcggatcaaatccgatggcacgcgcggcggc
caggtgtacgacatcagttttgcaaacatctgcatgcgtggtgtggcaaggccgctggtg
ttcgatgcgaactacgccaatgctgaagtgcgcagcaaactgccgagtttcagcggcatc
acgctgaccaatgtgcacgcgctgggttccaaggcattcggcggcggcgagctgagcttc
tacggctaccgcgatgcgaagaccaccttgccgatcagcatttcgctcgacaacgtggtg
ctggaaggtggaaaggtcgcgttcgcaaagccgcatttcggcgggcctgcgagcaacccg
ggcgcgacgcatttcacgtttaaaggcggtccagtgagctttttcgatcagctgaccgaa
tcagcgtccagcgatgtgcagctgcaaggtaagcctggccctggcgtgccgttgcaatgc
aacgacgccttcatcgcctaccactcggtgctgccggattcgccgatctga
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