Xanthomonas citri pv. fuscans: XFF4834R_chr24240
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Entry
XFF4834R_chr24240 CDS
T03094
Symbol
rnd
Name
(GenBank) probable ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfu03016
]
XFF4834R_chr24240 (rnd)
Enzymes [BR:
xfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XFF4834R_chr24240 (rnd)
Transfer RNA biogenesis [BR:
xfu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XFF4834R_chr24240 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Imm75
Motif
Other DBs
NCBI-ProteinID:
CDF61942
UniProt:
A0AB34QES9
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All DBs
Position
2796819..2797910
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AA seq
363 aa
AA seq
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MPHWITHPSELTDRLQAARPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGM
NAALKEWLIATDIVKVMHSASEDLVTFKCACGALPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLTKGETRSDWMRRPLSQAQLEYAADDVRYLFAIHDELTRRLTEQGRLEWLAED
ADRLLATVEHDDGERWPHVSLRAAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILENE
LASQLARFPPADLEALLRQFDKFPKAPRKLANAVWDALNTPLPDEEHAPLAQAATDGNKA
VLKRLQDTVAQRSRELGLPDGLLASRRHLETLMEQRSWPAALGQWRRSLLEAQLMPLLED
TAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgccccattggatcacccacccctccgagctgactgaccgcctgcaggcagcgcgacca
tcgcgcatcggcctggataccgaattcattcgcgaacgcacctactggccgcaactggcc
ctggtgcagatggccatcggcgaggagatcctgctgatcgacccgctgatccccggcatg
aacgcggcgctcaaggagtggttgatcgccaccgacatcgtcaaggtgatgcatagcgcc
agcgaagacctggttacgttcaaatgcgcgtgcggcgcattgccgcggccgttgttcgac
acccagatcgccgcggcgctggccggtgtcggtggcggcatgggctaccagaaactggtc
caggaagtcaccggcaccttgctgaccaagggcgaaacacgctcggactggatgcgtcgc
ccgctgtcgcaagcgcagctggaatatgccgccgatgacgtgcgctatctgtttgcgatc
cacgacgagctcacccgccgcctcaccgagcagggccgtctggagtggctggccgaagat
gccgaccgcctgctcgccacggtggagcacgacgatggcgagcgctggccgcatgtaagc
ctgcgcgccgcacaattcctggaaccggcggcgcaacgacggctgctgcgcctgctgcgt
tggcgcgacctgcaggcgcggcagagcgatcgcccgcgcagctggatcctggaaaacgaa
ctggccagccagctggcgcggttcccgcccgccgatctggaggccctgctgcgccagttc
gataaattccccaaggcgccgcgcaagctcgccaacgcggtgtgggatgcactcaacacc
ccgctgccggacgaagaacatgcgccgctggcgcaggccgccaccgacggcaacaaggcc
gtactcaagcgcctgcaggacaccgtggcgcagcggagccgcgaactcggcctgccggac
ggcctgttggcctcacgccgccacctggaaaccttgatggaacagcgcagctggcctgcg
gcgctaggccaatggcgccgttccctgctggaagcacagttgatgccgctgctggaagac
acagcagcgtag
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