Xanthomonas citri pv. fuscans: XFF4834R_chr25730
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Entry
XFF4834R_chr25730 CDS
T03094
Name
(GenBank) probable proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00470
D-Amino acid metabolism
xfu01100
Metabolic pathways
Module
xfu_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XFF4834R_chr25730
Enzymes [BR:
xfu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
XFF4834R_chr25730
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_racemase
PhzC-PhzF
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CDF62073
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All DBs
Position
complement(2983093..2984031)
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AA seq
312 aa
AA seq
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MHTIDVIDSHTAGEPTRVVLSGFPDLGDDDLAQCRERFRSEFDHWRSAIACEPRGSDTMV
GALLLPPRDPSACTGVIFFNNVGYLGMCGHGTIGVVRTLAELGRIAPGQRRIETPVGTVG
VELADDGTVSVDNVESYRFASGVEVEVPGHGRVCGDVAWGGNWFFITEQAPCALDLAHQR
ELTAYTEAIRLALEAAGITGEAGGEIDHIEVNGAAPDGSGVARNFVLCPGLAYDRSPCGT
GTSAKLACLAADGKLAEGERWVQQGILGSAFEGNYRLSGRGIAPRISGQAFITARSQLVI
DPADPFAWGIVA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccatcgacgtcatcgactcccacacggcgggcgagcctacccgcgtggtcctt
tccggttttccagatctgggcgatgacgatctggcgcagtgccgcgaacgctttcgcagc
gaattcgaccactggcgcagcgccatcgcctgcgagccgcgtgggtcggacaccatggtg
ggcgccttgttgctgccgccgcgcgacccgagcgcctgcaccggggtgatcttcttcaac
aacgtcggctacctgggcatgtgcgggcatggcacgattggcgtggtgcgcacgctggcc
gaactgggacgcatcgcgccgggccagcgccggatcgagaccccggtcggcacggtgggc
gtggagctggccgacgacggcacggtgtcggtggacaatgtcgagagctatcgctttgcc
agcggggttgaggtggaggtgccggggcatggccgggtgtgcggcgacgtggcctggggc
ggcaactggtttttcatcaccgagcaggcgccgtgcgcgctggacctggcgcaccagcgc
gaactgaccgcgtataccgaggcgattcggctggccctggaagcggccgggatcacgggc
gaggccggtggcgagatcgaccatatcgaagtcaacggcgctgcgcccgacggtagcggc
gtggcgcgcaatttcgtgctgtgcccgggactggcctatgaccgctcgccgtgcggcacc
ggcaccagcgccaagctggcgtgtctggcggcggacggcaagttggccgaaggcgagcgc
tgggtgcagcaaggcatcctgggcagtgccttcgaaggcaattatcggctgagcgggcgc
ggcattgcaccgcgcatcagcgggcaggccttcatcactgcgcgctcgcaattggtgatc
gacccggcggacccgtttgcctggggcatcgtggcctga
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