Xanthomonas citri pv. fuscans: XFF4834R_chr31720
Help
Entry
XFF4834R_chr31720 CDS
T03094
Symbol
rumA
Name
(GenBank) putative 23S rRNA (uracil-5-)-methyltransferase rumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xfu03009
]
XFF4834R_chr31720 (rumA)
Enzymes [BR:
xfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
XFF4834R_chr31720 (rumA)
Ribosome biogenesis [BR:
xfu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XFF4834R_chr31720 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
MTS
Methyltr_RsmB-F
Methyltransf_11
Cons_hypoth95
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
UPF0020
Methyltransf_23
Methyltransf_12
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
CDF62625
LinkDB
All DBs
Position
complement(3641373..3642806)
Genome browser
AA seq
477 aa
AA seq
DB search
MFVGRDNCCADRRGLRRSHLRQYAPFLPAACRHVARTRNRLDRTPFQTAVTDLSHDGRGV
ARRDGEGGKVTFISGALPGELVRAEPTARSRHFDEAKTVGVLEASPQRVTPRCPHFGVCA
GCVLQHLEESQQIVAKQRVLMDNLERIGHVTPQAVLPALTGDNWGYRRKGRFSVRRVEKK
DKTLVGFRELDPRFVADLSVCYTVIPQIGEKIPLLAALIEGMDGKRDIPQIEFIAGDDAV
ALTIRHMQPLSERDRQGWITFAQEHGFAIFLQPGGVDSVHPLWPQEVPLSFRLPQWDVEL
AFRPLDFIQVNASLNQKMIAHAVALLDAKPDDRVLDLFCGLGNFTLPLARVVREVVGVEG
DAGLVARAKENAQRNGLDNAQFYAADLTQDQRSAPWMRQGFDKLLLDPPRSGALEVLQQL
PLKTFQRIVYVSCHPGSLARDAGYLVNEQGFTLVSAGAMDMFPHTAHVESIAVFERR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgtggggcgcgacaattgttgcgctgaccggcgcggcctccgtcgatcgcatctg
cgacaatacgcaccctttttgcccgcagcttgtcgccacgtggccagaaccagaaaccgt
ctcgaccgaacccccttccagaccgcggtcaccgacctgagccatgacggccgcggggtc
gcccgccgcgatggcgagggcggcaaggtcaccttcatcagcggcgccttgccgggcgag
ttggtgcgcgccgaacccaccgcccgtagccggcatttcgatgaggccaagaccgtgggg
gtgctggaggcatcgccgcagcgggtcaccccgcgctgcccgcactttggcgtctgcgca
ggctgtgtgttgcagcatctggaggaatcgcagcagatcgtggccaaacagcgcgtactc
atggacaacctggaacgtatcggtcatgtcactccgcaagccgtgctgcctgcgctgacc
ggcgacaactgggggtatcggcgcaagggcaggttctcggtgcgtcgtgtcgagaagaag
gacaagaccttggtcggctttcgtgagctcgacccgcggttcgtggccgatctgtccgtt
tgctacacggtgattccgcagatcggcgagaagatccccttgcttgccgcgctgatcgaa
ggcatggatggcaagcgcgacattccgcagatcgaattcatcgccggcgacgatgcggtg
gccttgaccattcggcatatgcagccgctcagcgagcgcgaccgccagggctggatcaca
tttgcccaggagcacggctttgcgatttttctgcagcccggcggggtggacagcgtgcat
ccgctgtggccgcaggaagtgccgctatcgttccgcttgccgcagtgggatgtggaactg
gcgttccggccgctggactttattcaggtcaacgcgtcgctcaatcagaagatgatcgcg
catgcagtcgcgctgctggatgccaagcccgacgaccgcgtgctggacctgttctgcggc
ctgggcaacttcaccctgccgttggcgcgcgtggtgcgcgaagtggtaggtgtggaaggc
gacgccggactcgtggcacgggcgaaggaaaacgcccagcgcaatggcctggacaatgcg
cagttctacgccgccgacctgacccaggatcagcgcagcgcaccctggatgcgccagggc
ttcgacaagctgctgctggacccgccgcgctcgggcgccctggaagtgctgcagcagttg
ccgttgaagacgttccagcgcatcgtctatgtgagctgtcatcctggctcgctggcgcgc
gacgccggttatctggtcaacgagcagggcttcacgctggtctcggcgggcgcgatggac
atgttcccgcacaccgcgcacgtggaaagcattgcggtgtttgagaggcggtga
DBGET
integrated database retrieval system
