Xanthomonas citri pv. fuscans: XFF4834R_chr34770
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Entry
XFF4834R_chr34770 CDS
T03094
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00521
Streptomycin biosynthesis
xfu00523
Polyketide sugar unit biosynthesis
xfu00541
Biosynthesis of various nucleotide sugars
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
xfu01250
Biosynthesis of nucleotide sugars
Module
xfu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XFF4834R_chr34770 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XFF4834R_chr34770 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XFF4834R_chr34770 (rmlC)
Enzymes [BR:
xfu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XFF4834R_chr34770 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
CDF62909
UniProt:
A0AB34QFA5
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Position
complement(4033210..4033767)
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AA seq
185 aa
AA seq
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MKVIDTSLPGCFVIEPRVLGDERGQFFEAWNAERFDQHGFSARFLQSNISTSTKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPYFGQWTAAILSAENNRQFWIPEGFAHGFA
VLSERAVFSYLCTDIYVHDADASVRWDDATIGVDWPISSPILSAKDRAAPFLEDIAEERL
PVYQG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtcattgacacgtccttgcccggttgcttcgtcattgagccaagagtcctgggc
gacgagcggggtcaattcttcgaagcctggaatgccgaacgcttcgaccagcacggattt
tccgcgcggttcctgcagagcaatatctccacttcgaccaagggcgtgctgcgaggtctg
cactaccaatggccacggccgcaggggaagttggtcagcgtgctggagggcgaggtctac
gatgtggcggtggatatccggcgcggatcaccgtacttcggtcagtggactgccgccatc
ctgagcgccgagaacaatcggcagttctggattccggaaggttttgcgcatggctttgca
gttctgtccgaacgtgcggtcttcagttacctgtgcaccgacatctacgtccatgacgcc
gacgcaagcgtgcgctgggacgacgccaccatcggtgtggattggccgatcagttcgcca
attctgtctgcaaaggatagggctgcgccgtttcttgaggatatcgccgaagagcgcctg
ccggtttatcagggatga
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