Xanthomonas citri pv. fuscans: XFF4834R_chr34790
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Entry
XFF4834R_chr34790 CDS
T03094
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00521
Streptomycin biosynthesis
xfu00523
Polyketide sugar unit biosynthesis
xfu00525
Acarbose and validamycin biosynthesis
xfu00541
Biosynthesis of various nucleotide sugars
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
xfu01250
Biosynthesis of nucleotide sugars
Module
xfu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XFF4834R_chr34790 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XFF4834R_chr34790 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
XFF4834R_chr34790 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XFF4834R_chr34790 (rmlB)
00525 Acarbose and validamycin biosynthesis
XFF4834R_chr34790 (rmlB)
Enzymes [BR:
xfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
XFF4834R_chr34790 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
CDF62911
UniProt:
A0AB34QCY2
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All DBs
Position
complement(4034703..4035758)
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AA seq
351 aa
AA seq
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MATWLVTGGAGFIGGNFVLEAVARGVRVINLDALTYAGNLKTLASLEDNPNHVFVKGNIG
DGALVDRLLAEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLALLESVRDYWKALPQ
ESRHAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCDAIRTVLAK
GRVGETYNVGGNAERQNIEVVRTICALLDQQRPRSDGQLRASQITHVTDRPGHDRRYAID
ASKLRNELGWQPAYTFEQGIALTVQWYLDNQAWVQGVLDGSYRLERIGVAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacttggttagtgaccggcggagcgggcttcattggcggcaacttcgtgttggag
gcggtcgcgcgtggcgtgcgcgtcatcaacctggatgcgctcacttacgcaggcaacctg
aaaaccctggcgtctttggaggacaatccgaatcacgtcttcgtcaaaggcaatatcggc
gacggagcgctggtggatcgtttgctggcagagcaccagcctgacgcagttctgaacttt
gccgccgagagccacgtggaccgctcgattgatggtccgggtgcgtttatccagaccaat
gtcgtcggtaccctggccctgcttgaatccgtgcgggattactggaaggcgctgccgcag
gaatccaggcatgcgtttcgcttcctgcacgtgtcgaccgatgaggtgtacggcaccctg
ggagaaaccggaaaattcaccgaaaccacgccctacgctccgaattcgccttactccgca
tccaaggccgcatccgaccatctggtgcgggcgtttcatcatacgtacggcctgccggtg
ttaacgaccaattgctcgaacaactacggcccctaccattttcccgagaagttgattccg
ctggtcatcgcaaaggccttggcaggggagccactacccgtgtacggggatggaaagcag
gtgcgcgactggctgtttgtcagtgaccactgcgatgcgattcgcactgtgcttgcaaag
gggcgggttggggaaacctataacgtcggcggcaatgccgaacggcaaaacatcgaggtg
gtgcgtacgatctgcgcgctcctagatcaacaacgtccgcgctccgatggtcaacttcgt
gccagccagatcacgcacgtgaccgaccggcccggccatgatcgccgctatgccattgat
gccagcaaactccggaacgagctcgggtggcaaccggcttatacctttgagcagggcatt
gcactgacagtgcagtggtatctggataaccaagcctgggtgcaaggagtgttggacggt
agctatcggttggagcgaatcggggtcgcagcgtaa
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