Xanthomonas citri pv. fuscans: XFF4834R_chr35550
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Entry
XFF4834R_chr35550 CDS
T03094
Symbol
lpdA
Name
(GenBank) probable dihydrolipoamide dehydrogenase (e3 component of 2-oxoglutarate dehydrogenase complex)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00010
Glycolysis / Gluconeogenesis
xfu00020
Citrate cycle (TCA cycle)
xfu00260
Glycine, serine and threonine metabolism
xfu00280
Valine, leucine and isoleucine degradation
xfu00310
Lysine degradation
xfu00380
Tryptophan metabolism
xfu00620
Pyruvate metabolism
xfu00630
Glyoxylate and dicarboxylate metabolism
xfu00640
Propanoate metabolism
xfu00670
One carbon pool by folate
xfu00785
Lipoic acid metabolism
xfu01100
Metabolic pathways
xfu01110
Biosynthesis of secondary metabolites
xfu01120
Microbial metabolism in diverse environments
xfu01200
Carbon metabolism
xfu01210
2-Oxocarboxylic acid metabolism
xfu01240
Biosynthesis of cofactors
Module
xfu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xfu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xfu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xfu_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xfu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
XFF4834R_chr35550 (lpdA)
00020 Citrate cycle (TCA cycle)
XFF4834R_chr35550 (lpdA)
00620 Pyruvate metabolism
XFF4834R_chr35550 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
XFF4834R_chr35550 (lpdA)
00640 Propanoate metabolism
XFF4834R_chr35550 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XFF4834R_chr35550 (lpdA)
00280 Valine, leucine and isoleucine degradation
XFF4834R_chr35550 (lpdA)
00310 Lysine degradation
XFF4834R_chr35550 (lpdA)
00380 Tryptophan metabolism
XFF4834R_chr35550 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XFF4834R_chr35550 (lpdA)
00670 One carbon pool by folate
XFF4834R_chr35550 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xfu04147
]
XFF4834R_chr35550 (lpdA)
Enzymes [BR:
xfu01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
XFF4834R_chr35550 (lpdA)
Exosome [BR:
xfu04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
XFF4834R_chr35550 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
DAO
HI0933_like
BSH_YknX
NAD_binding_8
AlaDh_PNT_C
Thi4
FAD_binding_2
BSH_CusB
MCRA
3HCDH_N
DUF478
BSH_Fcp1
FAD_binding_3
2-Hacid_dh_C
Amino_oxidase
GCV_H
Motif
Other DBs
NCBI-ProteinID:
CDF62983
UniProt:
A0AB34QAQ2
LinkDB
All DBs
Position
complement(4126457..4128265)
Genome browser
AA seq
602 aa
AA seq
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MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKVGDTLSEGALVLLLETEGEAAETKAAPAAAAPTAAPGSKPPVTPSHRAPAEPAPSKPA
LASGKPADIECKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCIPSKAL
LHAAAVIDEVAHAGDFGVDFGQPRITLDKLREYKEKVVGKLTGGLASMAKQRKVRTVTGV
ASFVSPNELEIVGDDGKTQLLRFEHCIIAAGSQAVKLPNFPWDDKRVMDSTDALELHDIP
KTLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGVEVHL
KTKATDVKADKSGITVSFEAAVEGEKPGLQATAYDRVLVAVGRSPNGKKIGAEKAGVTIT
ERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIPSV
AYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEQTHRVIG
GAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITDLYIPK
KK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgttggcgacagcgtggccaaggaccagggcctggtcacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggccgccggtgtggtcaaggaactcaag
gtcaaggtcggcgacaccctctccgaaggcgcgctcgtactgctgctcgaaaccgaaggc
gaggccgctgagaccaaagccgccccggccgctgcagcgcctaccgccgccccgggcagc
aagccgccagtgacgccgtcgcaccgcgccccggccgaaccggcgccgtccaagccggca
ctggccagcggcaagccggccgacatcgaatgcaagatggtggtgctcggcgccggcccc
ggcggctacacggcagcgttccgcgcggccgatctgggcctggacacggtgctgatcgag
cgctacgccagcctgggcggtgtctgcctcaacgtcggctgcatcccgtccaaggcgctg
ctgcatgccgccgcggtgatcgatgaagtggcccatgccggcgacttcggcgtggacttc
ggtcagcccaggatcaccctggacaagctgcgcgagtacaaggaaaaagtggtcggcaag
cttaccggcggcctggccagcatggccaagcagcgcaaggtgcgcaccgtgaccggcgtg
gccagcttcgtctcgcccaacgagctggaaatcgtcggcgacgacggcaagacccagctg
ctgcgcttcgagcactgcatcatcgccgccggctcgcaggcggtgaagctgcccaacttc
ccgtgggacgacaagcgcgtgatggactccaccgacgcgctggagctgcacgacattccc
aagaccctgctggtggtcggcggcggcatcatcggcctggaaatggccaccgtgtacagc
gcgctcggcagcaaggtcaccgtggtcgagttcatggaccagctgatgccgggcgccgac
aaggacctggtcaagccgctggccgaccgcctgaaaaagcagggcgtcgaggttcatctc
aagaccaaggccaccgacgtcaaggccgacaagagcggcatcacggtgtccttcgaggcg
gctgtcgaaggcgaaaagcccggtctgcaggccaccgcgtacgaccgcgtgctggtcgcc
gtgggccgtagcccgaacggcaagaagatcggcgcggaaaaggccggcgtcaccatcacc
gagcgcggcttcattccggtcgatcggcagatgcgcaccaacgtgccgcacatcttcgcc
atcggcgacatcgtcggtaacccgatgctggcgcacaaggccacgcacgaaggcaagctg
gccgccgaagtggctgccggcgagaaaaaggaatgggtggcgcgggtgatcccgtcggtg
gcgtacaccaacccggaaatcgcctgggtcggcgtcaccgaaaccgaagccaaggccaag
ggcctgaaggtgggcgtggccaagttcccgtgggccgccagcggccgcgcgatcggcatc
ggccgtacggaaggcttcaccaagctgatcttcgatgaacagacccatcgcgtgatcggc
ggcgccatcgtcggcgtgcatgccggcgacctgctggccgaaatcggcctggcgatcgag
atgggggccgaagccgaagacatcggccacaccatccacgcgcatccgaccctgagcgag
tcggtcggcatggccgccgaggtctacgacggcaccatcaccgatctgtacatccccaag
aagaagtga
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