Xanthomonas citri pv. fuscans: XFF4834R_chr35860
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Entry
XFF4834R_chr35860 CDS
T03094
Symbol
lrp
Name
(GenBank) AsnC family leucine-responsive regulatory protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfu03000
]
XFF4834R_chr35860 (lrp)
03036 Chromosome and associated proteins [BR:
xfu03036
]
XFF4834R_chr35860 (lrp)
Transcription factors [BR:
xfu03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
XFF4834R_chr35860 (lrp)
Chromosome and associated proteins [BR:
xfu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XFF4834R_chr35860 (lrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
MarR
NirdL-like_HTH
HTH_11
HTH_20
DDRGK
HTH_Crp_2
DUF7343
GntR
MarR_2
LexA_DNA_bind
DUF6262
Motif
Other DBs
NCBI-ProteinID:
CDF63013
LinkDB
All DBs
Position
4156753..4157232
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AA seq
159 aa
AA seq
DB search
MSTRARELDKIDRKILRILQQEGRISFTELGERVGLSTTPCTERVRRLERDGAITGYYAR
LDPHYLKASLLVFVEISLAYKSGDIFEEFRRAALKLPNVLECHLVSGDFDYLLKARISEM
ASYRKLLGSTLLTMPHVRESKSYIVMEEVKETLALPIAD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgcgcccgcgagctggacaagatcgaccgcaagatcctgcgcatcctgcag
caggaggggcggatttcgtttaccgaactgggcgagcgggtcggcctgtcgaccacgccg
tgcaccgagcgcgtgcgacggctggagcgcgacggcgccatcaccggctattacgcgcgg
ctggacccgcactacctcaaggccagcctgctggtgttcgtggagatcagcctggcgtac
aaatccggcgacatcttcgaagaattccgccgcgccgcgctaaagctgcccaacgtgctg
gaatgccatctggtctccggcgacttcgactacctgctcaaggcgcgcatcagcgagatg
gcgtcctatcgtaagttgctcggcagcaccttgctgaccatgccgcatgtgcgtgaatcc
aagagctatatcgtgatggaagaggtcaaggagacgctggcgttgccgatcgccgattga
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